Merge in changes for CIDAtools v0.2.0#55
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…nd do not generate documentation Create deprecation warning functions: deprecation_warn - for functions that will be deprecated. deprecated_warn - to run for functions deprecated with version they were deprecated.
Added note in the documentation header - "To be deprecated".
Added a temporary internal file for functions matching the old name that simply warns the user of the function name change. Tried to fix possible bugs with cida path on Mac OS.
- rename functions and function variables to snake case - moved duplicate code to separate functions - tried to improve detection of the project data file. - consolidate logic for location into one function temp_refactored_message.R - added refactored functions with warning about new function name
- Added code to find the project default and then check global default locations if path is not found default.R - functions to set and get global defaults misc_fns.R - removed get/set meta data project_internal.R - internal function to find the default path if automatic path fails util_internal.R - added a function to check metadata and defaults are correct types and take the first value of an array if needed.
…ing/new files/etc.
Fixed R Check issues
update namespace
Added getter/setter for github location
…ilding and version bump
Updated .Rd files
Updated workflow
Fixed bugs found in testing default.R
…ed to fail during CI testing, but is useful to preserve functionality. Fixed typo
Fixed bugs found in testing Refactored project_data functions to project_meta_data functions
Bug fixes from testing.
…emplate so for now I'm disabling that specific test.
configuration to create a website with package documentation setup a workflow to commit website to gh-pages branch
# Conflicts: # .github/workflows/R-Build-Test_cleanupBranch.yml
…oad and opening an R project
Bug fixes from testing
Updates to testing project_internal.R
…nctions were removed.
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