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CU-86999tnz7 resync with v1 #74
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… supervised training
…uring deserialisation
That is, added things to create a fake model and a script to create + check model, as well as run a simple test on vocab.
…iprocessing method
alhendrickson
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Jun 24, 2025
* CU-86999tnz7: Update usage of constants for train/test splitting * CU-86999tnz7: Add alternative category names * CU-86999tnz7: Fix hashes due to config changes * CU-86999tnz7: Allow (optionally) training addons (e.g MetaCAT) during supervised training * CU-86999tnz7: Add optional change description when saving model * CU-86999tnz7: Add a test for description upon save * CU-86999tnz7: Fix typing during tests * CU-86999tnz7: Fix issues with extra labels, add relevant tests * CU-86999tnz7: Ported DeID improvments * CU-86999tnz7: Add missing resource files * CU-86999tnz7: Add preprocessors for UMLS and Snomed * CU-86999tnz7: Add usage monitoring * CU-86999tnz7: Use promise of a hash for usage monitoring * CU-86999tnz7: Allow 15 minutes for tests within main workflow * CU-86999tnz7: Add README for release scripts * CU-86999tnz7: Allowing conversion of beta namespaces to proper ones during deserialisation * CU-86999tnz7: Allow clearing unpacked data when saving model pack * CU-86999tnz7: Make sure model pack path refers to existing file/folder * CU-86999tnz7: Add base backwards compatibility stuff. That is, added things to create a fake model and a script to create + check model, as well as run a simple test on vocab. * CU-86999tnz7: Run model regression during workflow * CU-86999tnz7: Fix vocab data path during regression vocab test * CU-86999tnz7: Fix typo in script * CU-86999tnz7: Add hash to custom names unless explicitly disabled * CU-86999tnz7: Add backwards compatibiltiy script * CU-86999tnz7: Run backwards compatibility as part of workflow * CU-86999tnz7: Avoid runtime warnings due to config namespaces * CU-86999tnz7: Add initial multiprocessing option * CU-86999tnz7: Add minor tests for batching * CU-86999tnz7: Allow text index to be a string. Add doc string to multiprocessing method * CU-86999tnz7: Allow batching on a per-character basis * CU-86999tnz7: Add a few tests for a per-character batching * CU-86999tnz7: Fix issue with resulting text indices for multiprocessing * CU-86999tnz7: Add minor multiprocessing test * CU-86999tnz7: Allow an extra 5 minutes for workflow /tests
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Stuff to sync (i.e PRs after v2 rewrite started)
Stuff that's missing completely from v2