Releases: DeepPhe/ontologies
Sprint 19.0
-Ran script to clean up synonymy
-Added children to tumor class (e.g. BreastPrimaryTumor, BreastRegionalTumor, BreastDistantTumor)
-Added axioms to "upgrade" a generic disease (i.e. Carcinoma) to a more specific disease (i.e. Breast Carcinoma)
-Added synonyms for several different classes
Sprint 18
Sprint 16.0
- Added preferredTerms to all classes and properties to be used in visualization.
- Added draft representation for treatment regimens
- Added some synonyms
Sprint 14.0
-Created representation for radiologic tumor size, pathologic tumor size and aggregate pathologic tumor size.
-Created representation for Oncotype Dx score
-Created representation for calcifications
-Created representation for margin status
-Fixed representation for BIRADS
-Added "abnormal enhancement" as synonym for lesion
Sprint 13.0
-Added new disease hierarchy to nlpCancer.owl
-Created anatomicSite.owl to better control synonyms and body sites extracted from NLP system
-Added diagnostic tumor size and radiologic tumor size to nlpBreastCancer.owl
-Added oncotype class to nlpBreastCancer.owl
Sprint 11.0
- Removed metastasis class and moved all of its children classes under Disease/Disorder to help with double annotation at mention level.
- Fixed TNM URIs.
- Cleaned up synonyms for terms used for demo.
Sprint 10.0
- Added clock face positions as Body Site Modifier
- Added quadrant position as Body Site Modifier
- Moved Gene Mutations under Observation
- Fixed CUIs on all classes to represent Metathesaurus
Sprint 9.1
Final changes to the model for Sprint 9. Also, the TCGA mapping file has been added to the repository.
Sprint 9.0 Release
All of the changes made for sprint 9.
Sprint 8.0 Release
*Added procedures and medications to breast cancer model.
*Restructured nlp files.
*Added updated Schema and TermMapping local files.