refactor output formats #89
Description
actually I tried integrating in the latest version of the pipeline, and it does not look good:
SD outputs IMscores as Gene and spacemarkers metric
_index
cell_type1_cell_type_2
cell_type1_cell_type_3
...
SD does not output LRscores.
HD outputs IMscores as
_index
cell_interaction
effect_size
gene
n1
n2
p.adj
p.value
statistic
HD outputs LRscores as
_index
celltype0_to_celltype1
celltype0_to_celltype2
...
so IMscores for SD looks similar to LRscores of HD, and IMscores of HD looks unique.
Needs fixing by future gen!
Originally posted by @dimalvovs in #88 (comment)