Os wpt heterogenous e

apps/chodby_inv/.gitignore

@@ -1,2 +1,7 @@
 workdir
 **/workdir
+outputs/
+*.ssh*
+*.pdf
+tinyDA/
+*.idata

apps/chodby_inv/README.md

@@ -13,6 +13,30 @@ This will install the Python application `invapp` from sources in editable form
 the application dependencies including the `endorse` generic code package are 
 installed as well. 
 
+## Launching the app
+
+The main script for the WPT inversion is located inside of `piezo/wpt_bayes.py` and expects one integer argument corresponding to the index of selected event inside of `input_data/events.yaml`. Pressure sensor data is read from `input_data/piezo*.xslx` files, measured event-specific quantities (flow rate, conductivity etc) are taken from `input_data/wpt_2025_04_with_flux_on_multipacker.xlsx`. Synthetic benchmarks script is contained in `piezo/synthetic.py`. Summary table data collection and creation is in `piezo/summary_table.py`. Comparison plots can be generated by running the `piezo/plots.py` with first argument being the chosen borehole and second argument being the chosen borehole section. The current working directory has to contain two `.idata` files for the corresponding borehole and section, one from 2024 and the other from 2025.
+
+
+Python scripts can be launched as follows:
+
+0) Create and setup the virtual environment
+1) Activate the virtual environment
+   ```
+   source venv/bin/activate
+   ```
+2) Launch the appropriate script file
+   ```
+   python -m chodby_inv.piezo.<file_name>
+   ```
+
+For running the WPT inversion across all available events on metacentrum, run the bash script `run_all.sh` as follows:
+
+```
+qsub run_all.sh
+```
+
+
 ## Structure
 
 ### [fitting](fitting/README.md)

apps/chodby_inv/input_data/.gitignore

@@ -1,2 +1,3 @@
 /piezo_2024_11_27.xlsx
 /piezo_2025_04_08.xlsx
+/piezo_2025_09_24.xlsx

apps/chodby_inv/input_data/README.md

@@ -36,5 +36,6 @@ on large sections of the whole boreholes
 measurement by GDS (small fluxes) or weighting the expansion vessel
 must be merged with piezo file for full picture
 
+`pressure_summary.csv` and `flow_summary.csv` are summary tables from the inversions of the WPTs
 
 `resources` - supplementary documents from where the machine readable data were extracted 

apps/chodby_inv/input_data/__init__.py

@@ -14,8 +14,14 @@
 #blast_events_xlsx = input_dir / 'blast_events.xlsx'
 
 # smallest file
-piezo_measurement_file = input_dir / "piezo_2024_06_04.xlsx"
+#piezo_measurement_file = input_dir / "piezo_2024_06_04.xlsx"
 # last file
 #piezo_measurement_file = input_dir / "piezo_2025_04_08.xlsx"
+piezo_measurement_file = input_dir / "piezo_2025_09_24.xlsx"
 # configuration of the filtering sections
 # named sections of the data corresponding to interesting time intervals
+
+wpt_multipacker = input_dir / "wpt_2025_04_with_flux_on_multipacker.xlsx"
+
+flow_summary_csv = input_dir / "flow_summary.csv"
+pressure_summary_csv = input_dir / "pressure_summary.csv"