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Add Zenodo DOI badge

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#159 In Imageomics/pybioclip;

· egrace479 opened on Dec 4, 2025

Update references in metadata files

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#158 In Imageomics/pybioclip;

· egrace479 opened on Dec 4, 2025

Add section acknowledging contributors

help wantedExtra attention is neededExtra attention is needed

questionFurther information is requestedFurther information is requested

Status: Open.

#157 In Imageomics/pybioclip;

· egrace479 opened on Dec 3, 2025

Tests run only on push, not PR

Status: Open.

Bug

#150 In Imageomics/pybioclip;

· hlapp opened on Nov 5, 2025

CPU bottleneck in taxonomy aggregation for non-species predictions

Status: Open.

#147 In Imageomics/pybioclip;

· mitchellxh opened on Oct 23, 2025

Clearly explain the TOL training dataset used with <code>--subset</code> and open-ended classification and its relation to the TOL-10M dataset

Status: Open.

#96 In Imageomics/pybioclip;

· thompsonmj opened on Feb 17, 2025

Clarify safety and ease of use

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#67 In Imageomics/pybioclip;

· johnbradley opened on Nov 27, 2024

The CLI help menus are slow to display

Status: Open.

#57 In Imageomics/pybioclip;

· thompsonmj opened on Oct 23, 2024

Add option to save cached embeddings to disk for re-use

Status: Open.

#17 In Imageomics/pybioclip;

· thompsonmj opened on Jul 9, 2024