Skip to content

Running the automated test #11

Description

@sofiromano

Hi All,
Sorry to bother, but I have installed E2EDNA following the instructions. Everything looked ok, but when I run the automated test I got the following error message:
TESTING MODE #1: '2d structure'
Traceback (most recent call last):
File "/Users/Sofi_1/E2EDNA2/main.py", line 1, in
from opendna import *
File "/Users/Sofi_1/E2EDNA2/opendna.py", line 5, in
import interfaces
File "/Users/Sofi_1/E2EDNA2/interfaces.py", line 18, in
from utils import *
File "/Users/Sofi_1/E2EDNA2/utils.py", line 15, in
import MDAnalysis as mda
File "/Users/Sofi_1/anaconda3/lib/python3.10/site-packages/MDAnalysis/init.py", line 209, in
from .coordinates.core import writer as Writer
File "/Users/Sofi_1/anaconda3/lib/python3.10/site-packages/MDAnalysis/coordinates/init.py", line 767, in
from . import DMS
File "/Users/Sofi_1/anaconda3/lib/python3.10/site-packages/MDAnalysis/coordinates/DMS.py", line 36, in
import sqlite3
File "/Users/Sofi_1/anaconda3/lib/python3.10/sqlite3/init.py", line 57, in
from sqlite3.dbapi2 import *
File "/Users/Sofi_1/anaconda3/lib/python3.10/sqlite3/dbapi2.py", line 27, in
from _sqlite3 import *
ImportError: dlopen(/Users/Sofi_1/anaconda3/lib/python3.10/lib-dynload/_sqlite3.cpython-310-darwin.so, 0x0002): Symbol not found: _sqlite3_enable_load_extension
Referenced from: <95CD9EF5-94F8-3A49-B918-C2CE3A6D1EFD> /Users/Sofi_1/anaconda3/lib/python3.10/lib-dynload/_sqlite3.cpython-310-darwin.so
Expected in: <86E02645-0E19-3536-90DC-7FCB922A8BB4> /usr/lib/libsqlite3.dylib

END OF TEST #1: should see info of 2d structure in "record.txt" of working dir "run1"

Any idea on how to solve this?
Thanks in advance!

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions