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Test the effect of the confidence level with Kraken 2

Status: Open.

#49 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Apr 28, 2023

Add a tool for contamination detection and removal from metagenomic datasets

Status: Open.

#48 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Mar 21, 2023

R error with plot_avgsizes process

bugSomething isn't workingSomething isn't working

Status: Open.

#46 In NorwegianVeterinaryInstitute/Talos;

· hkaspersen opened on Jan 7, 2022

Issue with R when using a personal .Rprofile

Status: Open.

#45 In NorwegianVeterinaryInstitute/Talos;

· hkaspersen opened on Dec 14, 2021

Create singularity images from conda environments

bugSomething isn't workingSomething isn't working

Status: Open.

#44 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Dec 2, 2021

Add instructions to create an index of the human reference genome

Status: Open.

#43 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Jan 4, 2021

Set library location for the temporary R libraries to have

Status: Open.

#42 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Dec 22, 2020

Check how R-packages can be installed using yaml

bugSomething isn't workingSomething isn't working

Status: Open.

#32 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Aug 18, 2020

·  

Complete pipeline

create kraken2 database with host genomes

Status: Open.

#24 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Mar 26, 2020

·  

Complete pipeline

Add bracken diversity estimation to the pipeline

Status: Open.

#8 In NorwegianVeterinaryInstitute/Talos;

· Thomieh73 opened on Dec 13, 2019