docs(features): wire built-in diagnostics into the EP walkthrough#85
Merged
Conversation
New __Diagnostics__ section in scripts/features/expectation_propagation.py: mean_field_summary() posterior table + tour of the live artifacts the Phase-4 tooling (PyAutoFit#1349) emits during the fit (ep_history.csv, mean_field_history.csv / mean_field_evolution.png, graph_factors.png) and the check_sigma_collapse guard. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
This was referenced Jul 11, 2026
Jammy2211
added a commit
that referenced
this pull request
Jul 11, 2026
…-ref (#87) The EP #85 merge added scripts/features/expectation_propagation.py and a cross-ref from graphical_models.py, but llms-full.txt / workspace_index.json were never regenerated, turning the Navigator Check 'Catalogue staleness' job RED on main. Regenerated with regenerate_navigator.py autofit (catalogue only; idempotent; check_navigator green). Closes #86 Co-authored-by: Jammy2211 <JNightingale2211@gmail.com> Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Tracker #83 (follow-up from PyAutoFit#1335/#1349). New
__Diagnostics__section at the end ofscripts/features/expectation_propagation.py: amean_field_summary()posterior table plus a tour of the live artifacts the diagnostics tooling emits during the fit (ep_history.csv,mean_field_history.csv/mean_field_evolution.png,graph_factors.png) and thecheck_sigma_collapseguard — so the walkthrough demonstrates the built-in tooling instead of stopping at the raw mean field.API Changes
None — workspace script only.
Test Plan
mean_field_summary,check_sigma_collapse) exercised against the installed library and produce the expected table🤖 Generated with Claude Code