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2 changes: 2 additions & 0 deletions llms-full.txt
Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,8 @@ AUTO-GENERATED by PyAutoBuild — do not edit by hand; regenerate with generate.

## features

- [Feature: Expectation Propagation (Step-by-Step)](scripts/features/expectation_propagation.py): The `graphical_models.py` feature example composed a graphical model from many datasets and fitted it with a single non-linear search over the joint parameter space. That approach hits a ceiling: with tens of datasets the joint parameter space becomes too high dimensional to sample.
- Contents: Example Source Code (`af.ex`), Dataset, Model, Factor Graph, Mean Field, Cavity, Tilted Fit, Damped Update, Convergence, Full EP Fit, Wrap Up
- [Feature: Graphical Models](scripts/features/graphical_models.py): The examples so far have focused on fitting one model to one dataset, for example fitting 1D profiles composed of Gaussians to noisy 1D data. When multiple datasets were available each is fitted individually and their results interpreted one-by-one.
- Contents: Example Source Code (`af.ex`), Dataset, Analysis, Model, Analysis Factors, Factor Graph, Search, Hierarchical Models, Expectation Propagation
- [Feature: Interpolate](scripts/features/interpolate.py): It is common to fit a model to many similar datasets, where it is anticipated that one or more model parameters vary smoothly across the datasets.
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27 changes: 26 additions & 1 deletion workspace_index.json
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Expand Up @@ -237,6 +237,29 @@
"summary": "This cookbook provides an overview of the non-linear searches available in **PyAutoFit**, and how to use them.",
"title": "Cookbook: Searches"
},
{
"contents": [
"Example Source Code (`af.ex`)",
"Dataset",
"Model",
"Factor Graph",
"Mean Field",
"Cavity",
"Tilted Fit",
"Damped Update",
"Convergence",
"Full EP Fit",
"Wrap Up"
],
"cross_refs": [
"features/graphical_models.py",
"graphical_models.py"
],
"notebook": null,
"path": "scripts/features/expectation_propagation.py",
"summary": "The `graphical_models.py` feature example composed a graphical model from many datasets and fitted it with a single non-linear search over the joint parameter space. That approach hits a ceiling: with tens of datasets the joint parameter space becomes too high dimensional to sample.",
"title": "Feature: Expectation Propagation (Step-by-Step)"
},
{
"contents": [
"Example Source Code (`af.ex`)",
Expand All @@ -249,7 +272,9 @@
"Hierarchical Models",
"Expectation Propagation"
],
"cross_refs": [],
"cross_refs": [
"features/expectation_propagation.py"
],
"notebook": "notebooks/features/graphical_models.ipynb",
"path": "scripts/features/graphical_models.py",
"summary": "The examples so far have focused on fitting one model to one dataset, for example fitting 1D profiles composed of Gaussians to noisy 1D data. When multiple datasets were available each is fitted individually and their results interpreted one-by-one.",
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