Skip to content

chore(deps): Bump the all-julia-packages group across 2 directories with 1 update#188

Closed
dependabot[bot] wants to merge 1 commit into
mainfrom
dependabot/julia/all-julia-packages-618a417ce2
Closed

chore(deps): Bump the all-julia-packages group across 2 directories with 1 update#188
dependabot[bot] wants to merge 1 commit into
mainfrom
dependabot/julia/all-julia-packages-618a417ce2

Conversation

@dependabot

@dependabot dependabot Bot commented on behalf of github Jun 11, 2026

Copy link
Copy Markdown
Contributor

Updates the requirements on and DiffEqBase to permit the latest version.
Updates DiffEqBase to 7.5.5

Changelog

Sourced from DiffEqBase's changelog.

OrdinaryDiffEq.jl v7 / DifferentialEquations.jl v8 Breaking Changes

This release bumps to SciMLBase v3, RecursiveArrayTools v4, and includes breaking changes across DiffEqBase, OrdinaryDiffEqCore, and all solver sublibraries. It also coincides with the DifferentialEquations.jl v8 umbrella release, which is itself a breaking change to the user-facing meta-package.

DifferentialEquations.jl v8: scope reduction

DifferentialEquations.jl v8 no longer re-exports the full SciML solver suite. Previously, using DifferentialEquations pulled in OrdinaryDiffEq, StochasticDiffEq, DelayDiffEq, BoundaryValueDiffEq, Sundials, JumpProcesses, SteadyStateDiffEq, LinearSolve, NonlinearSolve, Optimization, etc. — a large default surface that drove up using time and made it unclear which package any given solver actually came from.

In v8, using DifferentialEquations only loads OrdinaryDiffEq. All other solver families have been removed from the umbrella. If your code relied on DifferentialEquations for SDEs, DDEs, BVPs, jumps, steady states, or any non-ODE solver, you will need to add the topic-specific package to your project explicitly.

Migration

Find the topic you need a solver for and add the corresponding sublib(s) directly. The DiffEqDocs tutorials and solver pages now specify, per algorithm, which package it ships from. Common cases:

Topic Old (DiffEq v7 umbrella) New (DiffEq v8)
ODEs using DifferentialEquations using OrdinaryDiffEq (or using OrdinaryDiffEqTsit5, OrdinaryDiffEqRosenbrock, … for individual solver families)
Stochastic ODEs using DifferentialEquations using StochasticDiffEq
Delay ODEs using DifferentialEquations using DelayDiffEq
Boundary value problems using DifferentialEquations using BoundaryValueDiffEq (or one of BoundaryValueDiffEqMIRK, BoundaryValueDiffEqFIRK, BoundaryValueDiffEqShooting, …)
Jump processes using DifferentialEquations using JumpProcesses
Steady state using DifferentialEquations using SteadyStateDiffEq
DAEs (mass matrix or implicit) using DifferentialEquations using OrdinaryDiffEq (mass matrix), using Sundials (IDA), or topic sublib
Sundials wrappers (CVODE, IDA, ARKODE) using DifferentialEquations using Sundials
Linear / nonlinear / optimization using DifferentialEquations using LinearSolve / using NonlinearSolve / using Optimization

For ODE work specifically, prefer importing only the sublib you need (e.g. using OrdinaryDiffEqTsit5: Tsit5) rather than the umbrella using OrdinaryDiffEq — the v7 ecosystem split lets you trim using time substantially. The DiffEqDocs tutorials and solver index annotate every algorithm with its host sublib.

Why

Removing the meta-package's broad re-exports lets each topic's package version cycle independently, eliminates the long using DifferentialEquations precompile chain for users who only need ODEs, and makes the dependency graph for any given script honest about what's actually being loaded.

This change is independent of the OrdinaryDiffEq v7 changes below — OrdinaryDiffEq v7 ships with DifferentialEquations v8, but you can also use OrdinaryDiffEq v7 directly without the umbrella package at all.

OrdinaryDiffEq.jl v7 Breaking Changes

This release bumps to SciMLBase v3, RecursiveArrayTools v4, and includes breaking changes across DiffEqBase, OrdinaryDiffEqCore, and all solver sublibraries.

Themes of the v7 release

Most of the breaking changes fall into a small set of recurring themes. Keep these in mind while reading the migration table — they explain why an individual change exists and often suggest the right migration direction:

  • Time to first solve (TTFS) reduction. Direct deps on Static.jl, StaticArrayInterface.jl, Polyester.jl, and StaticArrays.jl were dropped; using OrdinaryDiffEq now loads only the default solver set; ODEFunction switched to AutoSpecialize. All of this means less code loaded and more precompilation caching on first solve.

  • Type stability everywhere. All Bool solver/solve keyword arguments (autodiff, verbose, alias, lazy, …) were replaced by typed objects. Passing a Bool no longer changes dispatch in ways the compiler cannot specialize on, and the reverse is no longer allowed to silently fall back through slow generic paths. For example:

    # v6 — a Bool
    Rosenbrock23(autodiff = true)
    solve(prob, alg; verbose = false, alias = true)

... (truncated)

Commits

Updates DiffEqBase to 7.5.5

Changelog

Sourced from DiffEqBase's changelog.

OrdinaryDiffEq.jl v7 / DifferentialEquations.jl v8 Breaking Changes

This release bumps to SciMLBase v3, RecursiveArrayTools v4, and includes breaking changes across DiffEqBase, OrdinaryDiffEqCore, and all solver sublibraries. It also coincides with the DifferentialEquations.jl v8 umbrella release, which is itself a breaking change to the user-facing meta-package.

DifferentialEquations.jl v8: scope reduction

DifferentialEquations.jl v8 no longer re-exports the full SciML solver suite. Previously, using DifferentialEquations pulled in OrdinaryDiffEq, StochasticDiffEq, DelayDiffEq, BoundaryValueDiffEq, Sundials, JumpProcesses, SteadyStateDiffEq, LinearSolve, NonlinearSolve, Optimization, etc. — a large default surface that drove up using time and made it unclear which package any given solver actually came from.

In v8, using DifferentialEquations only loads OrdinaryDiffEq. All other solver families have been removed from the umbrella. If your code relied on DifferentialEquations for SDEs, DDEs, BVPs, jumps, steady states, or any non-ODE solver, you will need to add the topic-specific package to your project explicitly.

Migration

Find the topic you need a solver for and add the corresponding sublib(s) directly. The DiffEqDocs tutorials and solver pages now specify, per algorithm, which package it ships from. Common cases:

Topic Old (DiffEq v7 umbrella) New (DiffEq v8)
ODEs using DifferentialEquations using OrdinaryDiffEq (or using OrdinaryDiffEqTsit5, OrdinaryDiffEqRosenbrock, … for individual solver families)
Stochastic ODEs using DifferentialEquations using StochasticDiffEq
Delay ODEs using DifferentialEquations using DelayDiffEq
Boundary value problems using DifferentialEquations using BoundaryValueDiffEq (or one of BoundaryValueDiffEqMIRK, BoundaryValueDiffEqFIRK, BoundaryValueDiffEqShooting, …)
Jump processes using DifferentialEquations using JumpProcesses
Steady state using DifferentialEquations using SteadyStateDiffEq
DAEs (mass matrix or implicit) using DifferentialEquations using OrdinaryDiffEq (mass matrix), using Sundials (IDA), or topic sublib
Sundials wrappers (CVODE, IDA, ARKODE) using DifferentialEquations using Sundials
Linear / nonlinear / optimization using DifferentialEquations using LinearSolve / using NonlinearSolve / using Optimization

For ODE work specifically, prefer importing only the sublib you need (e.g. using OrdinaryDiffEqTsit5: Tsit5) rather than the umbrella using OrdinaryDiffEq — the v7 ecosystem split lets you trim using time substantially. The DiffEqDocs tutorials and solver index annotate every algorithm with its host sublib.

Why

Removing the meta-package's broad re-exports lets each topic's package version cycle independently, eliminates the long using DifferentialEquations precompile chain for users who only need ODEs, and makes the dependency graph for any given script honest about what's actually being loaded.

This change is independent of the OrdinaryDiffEq v7 changes below — OrdinaryDiffEq v7 ships with DifferentialEquations v8, but you can also use OrdinaryDiffEq v7 directly without the umbrella package at all.

OrdinaryDiffEq.jl v7 Breaking Changes

This release bumps to SciMLBase v3, RecursiveArrayTools v4, and includes breaking changes across DiffEqBase, OrdinaryDiffEqCore, and all solver sublibraries.

Themes of the v7 release

Most of the breaking changes fall into a small set of recurring themes. Keep these in mind while reading the migration table — they explain why an individual change exists and often suggest the right migration direction:

  • Time to first solve (TTFS) reduction. Direct deps on Static.jl, StaticArrayInterface.jl, Polyester.jl, and StaticArrays.jl were dropped; using OrdinaryDiffEq now loads only the default solver set; ODEFunction switched to AutoSpecialize. All of this means less code loaded and more precompilation caching on first solve.

  • Type stability everywhere. All Bool solver/solve keyword arguments (autodiff, verbose, alias, lazy, …) were replaced by typed objects. Passing a Bool no longer changes dispatch in ways the compiler cannot specialize on, and the reverse is no longer allowed to silently fall back through slow generic paths. For example:

    # v6 — a Bool
    Rosenbrock23(autodiff = true)
    solve(prob, alg; verbose = false, alias = true)

... (truncated)

Commits

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
  • @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
  • @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
  • @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
  • @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

…ith 1 update

Updates the requirements on  and [DiffEqBase](https://github.com/SciML/OrdinaryDiffEq.jl) to permit the latest version.

Updates `DiffEqBase` to 7.5.5
- [Release notes](https://github.com/SciML/OrdinaryDiffEq.jl/releases)
- [Changelog](https://github.com/SciML/OrdinaryDiffEq.jl/blob/master/NEWS.md)
- [Commits](https://github.com/SciML/OrdinaryDiffEq.jl/commits)

Updates `DiffEqBase` to 7.5.5
- [Release notes](https://github.com/SciML/OrdinaryDiffEq.jl/releases)
- [Changelog](https://github.com/SciML/OrdinaryDiffEq.jl/blob/master/NEWS.md)
- [Commits](https://github.com/SciML/OrdinaryDiffEq.jl/commits)

---
updated-dependencies:
- dependency-name: DiffEqBase
  dependency-version: 7.5.5
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: DiffEqBase
  dependency-version: 7.5.5
  dependency-type: direct:production
  dependency-group: all-julia-packages
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file julia Pull requests that update julia code labels Jun 11, 2026
@ChrisRackauckas-Claude

Copy link
Copy Markdown
Contributor

The compat bump here is necessary but not sufficient: DiffEqBase 7.5 / SciMLBase 3 remove the deprecated DEProblem and DEAlgorithm aliases that this package uses as abstract supertypes, so loading against 7.5 fails on its own. #190 adds the required source changes (AbstractDEProblem/AbstractDEAlgorithm) plus this same compat widening, and was verified locally against DiffEqBase 7.5.5 / SciMLBase 3.20.0 (147 Core testsets pass). Suggest closing this in favor of #190 once reviewed. cc @ChrisRackauckas

ChrisRackauckas added a commit that referenced this pull request Jun 14, 2026
…#190)

* Support DiffEqBase v7 / SciMLBase v3 breaking update

DiffEqBase 7.5 (OrdinaryDiffEq v7 / DifferentialEquations v8) removes the
deprecated DEProblem and DEAlgorithm aliases. Switch the abstract supertypes
to AbstractDEProblem and AbstractDEAlgorithm, which are available across both
the old (DiffEqBase 6.210, SciMLBase 2.153) and new (DiffEqBase 7.5,
SciMLBase 3) compat bounds, and widen the DiffEqBase compat to 7.5.

Co-Authored-By: Chris Rackauckas <accounts@chrisrackauckas.com>
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* Bump Enzyme/EnzymeTestUtils test floors for Downgrade CI

The Downgrade CI pins every dependency to its compat lower bound. With
DiffEqBase pinned to its floor 6.210.1, the old Enzyme floor 0.13.0 is
unsatisfiable: DiffEqBase 6.210.1 requires Enzyme >= 0.13.100 (via its
DiffEqBaseEnzymeExt compat). Additionally, EnzymeTestUtils 0.2.0 is runtime
-incompatible with Enzyme 0.13.100 — it calls guaranteed_const_nongen(T,
nothing) where the newer Enzyme expects a world-age UInt64, erroring in the
sensitivity_interface test. EnzymeTestUtils 0.2.4 (the version that raised its
own Enzyme floor to 0.13.78) fixes this.

Verified locally on Julia 1.10 with all deps pinned to their floors
(DiffEqBase 6.210.1, SciMLBase 2.153.0, Enzyme 0.13.100, EnzymeTestUtils
0.2.4): full GROUP=Core suite passes (147 testsets).

Co-Authored-By: Chris Rackauckas <accounts@chrisrackauckas.com>
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: ChrisRackauckas-Claude <accounts@chrisrackauckas.com>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
@dependabot @github

dependabot Bot commented on behalf of github Jun 14, 2026

Copy link
Copy Markdown
Contributor Author

Looks like these dependencies are no longer updatable, so this is no longer needed.

@dependabot dependabot Bot closed this Jun 14, 2026
@dependabot dependabot Bot deleted the dependabot/julia/all-julia-packages-618a417ce2 branch June 14, 2026 12:30
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

dependencies Pull requests that update a dependency file julia Pull requests that update julia code

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant