Lesson planning (Jan June 2018)

Some dates and themes for next semester's sessions (based on the September annual poll). Sessions take place on Tuesdays at 5pm.

Planning (January - June 2018) - 13 workshops

• January 9th: building CWL workflows (Common Workflow Language) - Pim
• January 23rd: (demo) Handling databases with Python - Zsofia
• February 6th: (practical) Exploratory data analysis with R - Joeri/Marc
• February 20th: (demo/practical) RNA-Seq analysis - Marc
• March 6th: (practical) Simple and multiple linear regressions - Emiel
• March 20th: (practical) Git and Github - Carlos/Mateusz (Carlos confirmed - Mateusz maybe)
• April 3rd: (demo/practical) Comparative genomics (Circos) - Like
• April 17th:(enlightenment) The PI data workshop: Data Stewardship, Research Data Management - Mateusz
• May 1st: Experimental design - Marc/Emiel
• May 15th: Research Data Management - Christine Staiger
• May 29th: Machine Learning applications (R/Python) - Marc/Pietro/Zsofia
• June 12th: Spatial data visualisation - Zsofia
• June 26th: Theme (metabarcoding?) - Susanne

Propositions for themed sessions

1. Functional programming: making functions (R and Python) - 2 sessions
2. Modular code - 1 session
3. Functional programming with purrr
4. Git and Github - 2 sessions
5. Simple/Rapid/interactive analysis of RNA-Seq data with Kallisto and Sleuth
6. Genomic pipelines with Snakemake (demo) - 1 session
7. Linear modelling - 2 sessions
8. Spatial datasets - 1 session
9. Databases**
10. (Good) Research Data Management
11. Plotting genomic information with Genomic Ranges