Add ryan's sliding RP implementation#6
Open
ryan-ressmeyer wants to merge 1 commit intoSteinmetzLab:masterfrom
Open
Add ryan's sliding RP implementation#6ryan-ressmeyer wants to merge 1 commit intoSteinmetzLab:masterfrom
ryan-ressmeyer wants to merge 1 commit intoSteinmetzLab:masterfrom
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Adds a new module 'python/ryan_rp_methods.py' that contains my implementations of the slidingRP metric. The module implements a version of the existing functions to compute a refractory violation confidence tensor, in addition to methods for finding the critical contamination rate using a binary search or analytically. Running the script compares the speed of the methods against one another, finding that the analytical approach is much faster, but that the speedup is small compared to the time to compute the autocorrelograms.