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1. uc-cdis/label-boosted-RAG-for-RRG uc-cdis/label-boosted-RAG-for-RRG Public

   LaB-RAG (Label Boosted Retrieval Augmented Generation): a generalizable framework for captioning using categorical labels as image descriptors.

   Python 13 2

2. uc-cdis/gdc-cohort-copilot uc-cdis/gdc-cohort-copilot Public

   GDC Cohort Copilot is an AI copilot tool to assist in the curation of cohorts from the NCI GDC using natural language.

   Python 6

3. multimodal-cancer-modeling multimodal-cancer-modeling Public

   Multimodal Cancer Modeling in the Age of Foundation Model Embeddings

   Jupyter Notebook 7 1

4. czbiohub-chi/immune-llm-acl czbiohub-chi/immune-llm-acl Public

   Virtual CRISPR Code and benchmark datasets for predicting CRISPR screen results with LLMs, as described in "Virtual CRISPR: Can LLMs Predict CRISPR Screen Results?" for the BioNLP workshop at ACL 2025

   Jupyter Notebook 4 1