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82 changes: 72 additions & 10 deletions _data/alumni_members.yml
Original file line number Diff line number Diff line change
@@ -1,10 +1,72 @@
- name: Gijsbert Verdoes
photo: verdoes.jpg
duration: In the Allan Lab 2015 - 2018, now Project manager at the FMD
info: Fine mechanical engineer associated with the FMD working in our group
email: verdoes@fmd.physics.leidenuniv.nl
number_educ: 1
education1: Leidse instrumentmakers School
education2:
education3:
education4:
- name: Céline Provins
photo: provins.png
email: celine.provins@unil.ch
title: PhD Student (Jan 2021 - Mar 2025); Research Engineer (Mar 2025 - Jul 2025)
education:
- Ph.D. in Neuroscience (2021 - 2025) University of Lausanne (Lausanne, Switzerland)
- 6 months research visit in Stanford University (CA, US)
- M.Sc. (2018-2020) EPFL (Lausanne, Switzerland)
- 1 year exchange Uppsala University (Sweden)
- B.Sc. (2015-2017) EPFL (Lausanne, Switzerland)
bio: |
Throughout her PhD, Céline focused on characterizing and improving the reliability of brain connectivity estimates
by addressing key sources of variability in MRI-based measurements.
To mitigate the impact of methodological flexibility in neuroimaging pipelines, she contributed to standardizing
quality assurance and quality control (QA/QC) procedures by developing a comprehensive QA/QC protocol that can be
easily reused and adapted to other project needs.
She also helped enhance MRIQC and fMRIPrep, widely used tools that standardize image preprocessing.
Additionally, she investigated the impact of defacing on perceived image quality, demonstrating that QC procedures
should ideally be performed before defacing to prevent biased assessments.

Céline also co-led the acquisition of the Human Connectome Phantom (HCPh) dataset, a large-scale initiative designed to
systematically assess the reliability of functional and structural connectivity.
By repeatedly scanning a single individual across multiple scanners, the dataset provides a unique opportunity to
disentangle between-scanner and within-scanner variability in both functional and diffusion MRI.
It also serves as a valuable resource for developing improved methods to remove non-neural signal fluctuations in fMRI.

Now, as a Research Engineer, Céline is finalizing the analysis of the HCPh dataset and preparing it for public
sharing, further supporting the lab’s efforts to promote open science and reproducibility in MRI research.
links:
- '[Google Scholar](https://scholar.google.com/citations?user=sXWWF2MAAAAJ&hl=en)'
- '[ORCID](https://orcid.org/0000-0002-1668-9629)'

- name: Elodie Savary
photo: photo_esavary300x300.png
email: elodie.savary@outlook.com
title: Scientific software developer (Dec 2022 - May 2024)
education:
- PhD. (2022) EPFL (Lausanne, Switzerland)
- M.Sc. (2018) EPFL (Lausanne, Switzerland)
- B.Sc. (2016) EPFL (Lausanne, Switzerland)
bio: |
My background is in Astrophysics. During my PhD, I developed deep-learning tools to classify, segment and generate images.
In addition to a machine learning core, my PhD research involved a substantial amount of image processing.
In The AxonLab, I contribute to implementing preprocessing tools under the umbrella of the [*NiPreps* ecosystem](https://nipreps.org) to improve computational reproducibility and reduce methodological variability in MRI research.
In addition to this, I am strongly committed to promoting open science.
links:
- '[Google Scholar](https://scholar.google.com/citations?user=2eOoXSoAAAAJ&hl=en)'
- '[ORCID](https://orcid.org/0000-0002-3896-6906)'

- name: Alexandre Cionca
photo: acionca.jpeg
email: alexandre.cionca@gmail.com
title: Research assistant (Sep 2023 - Dec 2023)
education:
- Research engineer (2021-2023) UNIGE & HUG (Geneva, Switzerland)
- M.Sc. (2018-2020) EPFL (Lausanne, Switzerland)
- B.Sc. (2014-2017) EPFL (Lausanne, Switzerland)
bio: |
Alexandre Cionca is a research assistant in the Department of Radiology at the University Hospital of
Lausanne (CHUV).
He graduated from EPFL with a specialization in Computational Science and Engineering (CSE).
He focused his studies on data science and statistical learning applied to the neuroimaging field.
He then joined the Clinical and Experimental Neuropsychology lab ([CENLab](https://cenlab.ch)) at the
University of Geneva, where he worked on all-around data processing and analysis for the
[COVID-COG](https://unige.ch/fapse/cenlab/research/ongoing-projects/ff) project.
His research included computational modeling of functional MRI in the unraveling of long-term
neuropsychological effects following a SARS-CoV-2 infection.
He is now fulfilling his civil service with the Axon Lab in an initiative to evaluate
the reliability of the clinical MRI workflow that routinely aids medical decision at CHUV.
links:
- '[Google Scholar](https://scholar.google.ch/citations?user=8ei7r00AAAAJ&hl)'
- '[ORCID](https://orcid.org/0000-0002-1910-9650)'
77 changes: 0 additions & 77 deletions _data/team_members.yml
Original file line number Diff line number Diff line change
Expand Up @@ -27,80 +27,3 @@
- '[Google Scholar](https://scholar.google.ch/citations?user=sipSQH8AAAAJ&hl=en)'
- '[ORCID](https://orcid.org/0000-0001-8435-6191)'
- '[Publons](https://publons.com/researcher/311253)'

- name: Céline Provins
photo: provins.png
email: celine.provins@unil.ch
title: Research Engineer (2021 - currently)
education:
- Ph.D. in Neuroscience (2021 - 2025) University of Lausanne (Lausanne, Switzerland)
- 6 months research visit in Stanford University (CA, US)
- M.Sc. (2018-2020) EPFL (Lausanne, Switzerland)
- 1 year exchange Uppsala University (Sweden)
- B.Sc. (2015-2017) EPFL (Lausanne, Switzerland)
bio: |
Throughout her PhD, Céline focused on characterizing and improving the reliability of brain connectivity estimates
by addressing key sources of variability in MRI-based measurements.
To mitigate the impact of methodological flexibility in neuroimaging pipelines, she contributed to standardizing
quality assurance and quality control (QA/QC) procedures by developing a comprehensive QA/QC protocol that can be
easily reused and adapted to other project needs.
She also helped enhance MRIQC and fMRIPrep, widely used tools that standardize image preprocessing.
Additionally, she investigated the impact of defacing on perceived image quality, demonstrating that QC procedures
should ideally be performed before defacing to prevent biased assessments.

Céline also co-led the acquisition of the Human Connectome Phantom (HCPh) dataset, a large-scale initiative designed to
systematically assess the reliability of functional and structural connectivity.
By repeatedly scanning a single individual across multiple scanners, the dataset provides a unique opportunity to
disentangle between-scanner and within-scanner variability in both functional and diffusion MRI.
It also serves as a valuable resource for developing improved methods to remove non-neural signal fluctuations in fMRI.

Now, as a Research Engineer, Céline is finalizing the analysis of the HCPh dataset and preparing it for public
sharing, further supporting the lab’s efforts to promote open science and reproducibility in MRI research.

links:
- '[Google Scholar](https://scholar.google.com/citations?user=sXWWF2MAAAAJ=en)'
- '[ORCID](https://orcid.org/0000-0002-1668-9629)'

- name: Elodie Savary
photo: photo_esavary300x300.png
email: elodie.savary@outlook.com
title: Scientific software developer
education:
- PhD. (2022) EPFL (Lausanne, Switzerland)
- M.Sc. (2018) EPFL (Lausanne, Switzerland)
- B.Sc. (2016) EPFL (Lausanne, Switzerland)
bio: |
My background is in Astrophysics. During my PhD, I developed deep-learning tools to classify, segment and generate images.
In addition to a machine learning core, my PhD research involved a substantial amount of image processing.
In The AxonLab, I contribute to implementing preprocessing tools under the umbrella of the [*NiPreps* ecosystem](https://nipreps.org) to improve computational reproducibility and reduce methodological variability in MRI research.
In addition to this, I am strongly committed to promoting open science.

links:
- '[Google Scholar](https://scholar.google.com/citations?user=2eOoXSoAAAAJ&hl=en)'
- '[ORCID](https://orcid.org/0000-0002-3896-6906)'

- name: Alexandre Cionca
photo: acionca.jpeg
email: alexandre.cionca@gmail.com
title: Research assistant
education:
- Research engineer (2021-2023) UNIGE & HUG (Geneva, Switzerland)
- M.Sc. (2018-2020) EPFL (Lausanne, Switzerland)
- B.Sc. (2014-2017) EPFL (Lausanne, Switzerland)

bio: |
Alexandre Cionca is a research assistant in the Department of Radiology at the University Hospital of
Lausanne (CHUV).
He graduated from EPFL with a specialization in Computational Science and Engineering (CSE).
He focused his studies on data science and statistical learning applied to the neuroimaging field.
He then joined the Clinical and Experimental Neuropsychology lab ([CENLab](https://cenlab.ch)) at the
University of Geneva, where he worked on all-around data processing and analysis for the
[COVID-COG](https://unige.ch/fapse/cenlab/research/ongoing-projects/ff) project.
His research included computational modeling of functional MRI in the unraveling of long-term
neuropsychological effects following a SARS-CoV-2 infection.
He is now fulfilling his civil service with the Axon Lab in an initiative to evaluate
the reliability of the clinical MRI workflow that routinely aids medical decision at CHUV.

links:
- '[Google Scholar](https://scholar.google.ch/citations?user=8ei7r00AAAAJ&hl)'
- '[ORCID](https://orcid.org/0000-0002-1910-9650)'
58 changes: 56 additions & 2 deletions _pages/team.md
Original file line number Diff line number Diff line change
Expand Up @@ -51,9 +51,63 @@ Jump to [staff](#staff), [master and bachelor students](#master-and-bachelor-stu
</div>
</div>

{% if member.bio %}
<p><small>{{ member.bio }}</small></p>
{% if member.education %}
<ul style="overflow: hidden">
{% for edu_item in member.education %}
<li> {{ edu_item }} </li>
{% endfor %}
</ul>
{% endif %}
</div>

{% assign number_printed = number_printed | plus: 1 %}

{% if even_odd == 1 %}
</div>
{% endif %}

{% endfor %}

{% assign even_odd = number_printed | modulo: 2 %}
{% if even_odd == 1 %}
</div>
{% endif %}

## Our alumni

{% assign number_printed = 0 %}
{% for member in site.data.alumni_members %}

{% assign even_odd = number_printed | modulo: 2 %}

{% if even_odd == 0 %}
<div class="row">
{% endif %}

<div class="col-sm-6 clearfix">

<!-- Card -->
<div class="card mb-3 border-0">
<div class="row g-0">
<div class="col-md-4">
<img src="{{ site.url }}{{ site.baseurl }}/images/teampic/{{ member.photo }}" class="img-fluid rounded-start" alt="{{ member.name }}">
</div>
<div class="col-md-8">
<div class="card-body">
<h5 class="card-title">{{ member.name }}</h5>
{% if member.title %}
<h6 class="card-subtitle mb-2 text-muted">{{ member.title }}</h6>
{% endif %}
{% if member.email %}
<p class="card-text">email: <{{ member.email }}></p>
{% endif %}
{% if member.links %}
<p class="card-text"><small>{% for link in member.links %}{{ link }}{% unless forloop.last %} | {% endunless %}{% endfor %}</small></p>
{% endif %}
</div>
</div>
</div>
</div>

{% if member.education %}
<ul style="overflow: hidden">
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