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1. Deep-Learning-to-predict-resistance-to-Fluoroquinolone-antibiotics Deep-Learning-to-predict-resistance-to-Fluoroquinolone-antibiotics Public

   In this interactive tutorial we will preform machine-learning (deep learning) analysis of bacterial DNA gyrase/topoisomerase in order to predict resistance to Fluoroquinolones antibiotics. We will …

   Jupyter Notebook 4 1

2. Local_LLMs_stuff Local_LLMs_stuff Public

   Code and notebooks for connecting and interacting with Local LLMs, agentic tool usage and RAG practices. The implementation will be done mostly with LangChain framework, and maybe others modules as…

   Jupyter Notebook 1

3. pouchitis_classifiers pouchitis_classifiers Public

   Dysbiosis in metabolic genes of the gut microbiomes of patients with inflammatory bowel diseases

   Python

4. url-text-fetch-mcp url-text-fetch-mcp Public

   Url webpage text fetcher with FastMCP for LLM/agents frontends such as LM-Studio

   Python

5. sqlite-toolkit-mcp sqlite-toolkit-mcp Public

   SQLite toolkit build with FastMCP to perform standard SQL queries for LLM/agents frontends such as LM-Studio

   Python 1

6. production-rag-system production-rag-system Public

   A modular, production-ready Retrieval-Augmented Generation (RAG) system with web app frontend, comprehensive error handling, documents processing tools, input validation, and monitoring capabilities

   Python 2