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ZiyanZhuang/README.md

Life science researcher exploring the intersection of
Synthetic Biology · Protein Language Models · AI for Science
B.S. @ XJU · Builder of Zhuangzhou · CYPForge · AutoGraphRAG

 


Zhuangzhou — Autonomous Scientific Agent

Zhuangzhou (庄周) — Autonomous Scientific Agent for
Enzyme Design & Metabolic Engineering
Knowledge Graph · Multi-Agent Brain · Cross-Scale Bioengineering · Think→Act→Observe→Review Loop

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  1. CYPForge CYPForge Public

    Strict orchestration and audit shell for cytochrome P450 Amber MD preprocessing. Ten gated stages with JSON manifests cover heme/CYM, ligand RESP/GAFF2, protonation, solvation, ionization, and pre-…

    Python 1

  2. zhuangzhou zhuangzhou Public

    Autonomous scientific agent for enzyme design & metabolic engineering — a Think→Act→Observe→Review closed loop integrating cross-disciplinary knowledge graphs, multi-agent reasoning, and hierarchic…

    Python 1

  3. HONOR-AI-Service-Disable-Scripts HONOR-AI-Service-Disable-Scripts Public

    一个轻量级的批处理脚本，用于停止、禁用和清理 Windows 系统上的 HONOR AI 服务程序 (HnPCAIService.exe)。

    PowerShell 11

  4. DAU-Model DAU-Model Public

    Diffusion-Adsorption-Uptake Model for Morphogen Validation

    Python