prjna2srr.sh : Portable script to convert PRJNA (BioProject accession ID) to SRR

2023-03-30.101645.mp4

Features

• minimal dependencies
  • bash
  • wget or curl

Installation

curl -O https://raw.githubusercontent.com/akikuno/prjna2srr/main/prjna2srr.sh
# or
wget https://raw.githubusercontent.com/akikuno/prjna2srr/main/prjna2srr.sh

Usage

sh prjna2srr.sh <BioPorject Number>

Example

sh prjna2srr.sh PRJNA427709
# SRR6425161
# SRR6425162
# SRR6425163
# SRR6425164

Other tools

• gse2srr.sh : to convert IDs from GSE to SRR

Questions and bug reporting

Questions, bug reporting or any inqueries are always welcome!
Please reprt to the GitHub Issues

• Questions by creating a new issue with the question tag
• Bugs by creating a new issue with the bug tag