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look into protcid
datasetsBuilding or preprocessing data for trainingBuilding or preprocessing data for trainingStatus: Open.#419 In alex-hh/profam;- Status: Open.#415 In alex-hh/profam;
Precision notes
referenceUseful information for referenceUseful information for referenceStatus: Open.#363 In alex-hh/profam;Compute aa recovery in different residue types - e.g. buried vs surface
evaluationsBuilding evaluations to test model performanceBuilding evaluations to test model performanceStatus: Open.#348 In alex-hh/profam;set up foldseek search pipeline for building test time documents (e.g. for proteingym)
help wantedExtra attention is neededExtra attention is neededStatus: Open.#300 In alex-hh/profam;- Status: Open.#249 In alex-hh/profam;
Pick sensible holdout strategy for foldseek clusters
datasetsBuilding or preprocessing data for trainingBuilding or preprocessing data for traininghelp wantedExtra attention is neededExtra attention is neededStatus: Open.#108 In alex-hh/profam;