Implement genomic figure rendering and template management features#16

Merged

alsmith151 merged 16 commits intomainfrom

feat/templating-for-plots

Mar 25, 2026

Commits on Mar 23, 2026

Add rendering and template management for genomic figures
alsmith151
committed
feat(cli): add init, plot, and validate commands for template generation and rendering
alsmith151
committed

Commits on Mar 25, 2026

feat(enums): expand TrackType to cover all track aliases and former TemplateTrackType values
alsmith151
committed
feat(aesthetics): add BaseAesthetics and BaseMultiColorAesthetics base classes
alsmith151
committed
feat(registry): add TrackRegistry with register decorator and singleton
alsmith151
committed
feat(tracks): register signal tracks; migrate aesthetics to BaseAesthetics and BaseMultiColorAesthetics
alsmith151
committed
feat(tracks): register interval and guide tracks; migrate aesthetics to BaseAesthetics
alsmith151
committed
feat(tracks): register Hi-C and QuantNado tracks; fix test failures from aesthetics migration
alsmith151
committed
feat(tracks): expose registry from tracks/__init__.py; ensure all decorators fire on import
alsmith151
committed
feat(theme): add Theme.apply() single-pass method replacing three-pass theme application
alsmith151
committed
refactor(figure): replace _alias_map with registry; use Theme.apply() per track; remove doc-inject side effect
alsmith151
committed
refactor: replace TemplateTrackType with unified TrackType throughout; remove from __all__
alsmith151
committed
Enhance documentation and refactor code for clarity and usability
alsmith151
committed
refactor(figure): improve type hints and null checks; streamline track registry usage
alsmith151
committed
refactor(bigwig): remove unused aesthetics attributes from BigwigAesthetics class
alsmith151
committed
Refactor Plotnado codebase for improved maintainability and extensibility
alsmith151
committed

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Implement genomic figure rendering and template management features#16

Implement genomic figure rendering and template management features#16
alsmith151 merged 16 commits intomainfrom
feat/templating-for-plots

Commits on Mar 23, 2026

Add rendering and template management for genomic figures

feat(cli): add init, plot, and validate commands for template generation and rendering

Commits on Mar 25, 2026

feat(enums): expand TrackType to cover all track aliases and former TemplateTrackType values

feat(aesthetics): add BaseAesthetics and BaseMultiColorAesthetics base classes

feat(registry): add TrackRegistry with register decorator and singleton

feat(tracks): register signal tracks; migrate aesthetics to BaseAesthetics and BaseMultiColorAesthetics

feat(tracks): register interval and guide tracks; migrate aesthetics to BaseAesthetics

feat(tracks): register Hi-C and QuantNado tracks; fix test failures from aesthetics migration

feat(tracks): expose registry from tracks/init.py; ensure all decorators fire on import

feat(theme): add Theme.apply() single-pass method replacing three-pass theme application

refactor(figure): replace _alias_map with registry; use Theme.apply() per track; remove doc-inject side effect

refactor: replace TemplateTrackType with unified TrackType throughout; remove from all

Enhance documentation and refactor code for clarity and usability

refactor(figure): improve type hints and null checks; streamline track registry usage

refactor(bigwig): remove unused aesthetics attributes from BigwigAesthetics class

Refactor Plotnado codebase for improved maintainability and extensibility