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1. LincolnSteinLab/oncoGAN LincolnSteinLab/oncoGAN Public

   A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).

   Python 36 5

2. RFcaller RFcaller Public

   A pipeline that uses read-level features and extra trees/random forest algorithms for accurate and fast detection of somatic mutations in next generation sequencing data

   Python 2 3