Search results

Is 500 samples the maximum supported by Java ARACNE?

Status: Open.

#20 In califano-lab/ARACNe-AP;

· PhiliJ opened on Feb 4, 2025

Is there a reason to use 1E-8 as the p-value threshold?

Status: Open.

#19 In califano-lab/ARACNe-AP;

· sng-soo opened on Sep 10, 2024

Questions about the minimum sample size required for the algorithm

Status: Open.

#17 In califano-lab/ARACNe-AP;

· biginfor opened on Aug 11, 2022

Failure when using single-cell data

Status: Open.

#16 In califano-lab/ARACNe-AP;

· garciaaxnih opened on Feb 14, 2022

Ouput of ARACNe plotting help

Status: Open.

#15 In califano-lab/ARACNe-AP;

· pallavisurana1 opened on Feb 7, 2022

Question about the context-specific regulon generation

Status: Open.

#14 In califano-lab/ARACNe-AP;

· xiaoyonf opened on Sep 28, 2021

Unable to install ARACNe -AP

Status: Open.

#13 In califano-lab/ARACNe-AP;

· aravindgn1 opened on Aug 10, 2021

Minimal effort performance improvements

Status: Open.

#11 In califano-lab/ARACNe-AP;

· mcamagna opened on Jun 13, 2021

Would you please help me to make it faster?

Status: Open.

#10 In califano-lab/ARACNe-AP;

· huqingtao2018 opened on Mar 23, 2021

Using --seed in calculateThreshold step

Status: Open.

#9 In califano-lab/ARACNe-AP;

· sarahhp opened on Jun 2, 2020

Hope you can add permutation in this tool

Status: Open.

#8 In califano-lab/ARACNe-AP;

· zengyr49 opened on Oct 9, 2019

.adj format file

Status: Open.

#6 In califano-lab/ARACNe-AP;

· TaoDFang opened on Jun 25, 2019