Skip to content

optimise memory requirement#8

Merged
Acribbs merged 2 commits intocribbslab:mainfrom
as2110:main
May 1, 2025
Merged

optimise memory requirement#8
Acribbs merged 2 commits intocribbslab:mainfrom
as2110:main

Conversation

@as2110
Copy link
Copy Markdown
Contributor

@as2110 as2110 commented May 1, 2025

  1. edit memory and time requirements for cgat pipeline
  2. restrict polyA and polyT searches to end 100 bases to increase accuracy and speed of filter

as2110 added 2 commits April 30, 2025 12:59
updated memory and time limit for slurm to allow for complex concats
edit polyT and polyA filter to use just first and last 100 bases.
@Acribbs Acribbs merged commit 362cdc8 into cribbslab:main May 1, 2025
2 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants