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* fix[ml]: adjust tests to reflect latest apis of 3rd party libraries (xgboost, lightgbm) * Build wheels on pull_request * Maximize wheel build parallellization * git submodule update --remote --merge packages/vaex-core/vendor/pybind11 * Fix gcc error * Fix workflow syntax * Remove redefinition https://github.com/pybind/pybind11/blob/769fd3b889fef6cddb060f2a0be26aee62b4da05/include/pybind11/pytypes.h#L859 https://github.com/ddelange/vaex/actions/runs/3965609112/jobs/6795506653#step:6:2110 * Disable win32 https://github.com/ddelange/vaex/actions/runs/3965689146/jobs/6795667118#step:6:538 * Remove testing leftovers * Add upper cap on lightgbm lightgbm-org/LightGBM#5196 (comment) * Migrate to mamba-org/setup-micromamba@v1 * Upload release assets on Github (pre)release * Add missing permission for release assets * Build cp312 wheels * Remove setuptools and wheel from pyproject.toml * Replace imp with importlib * chore: trigger ci * ci: upgrade xcode for brew install libomp * update requirements-ml to comply with the latest veex-ml expectations. * try to install lightgbm via pip * fix: only the mini taxi file is on s3 for cost savings * ci: pin dask<2024.2.0 to get the same hash keys This version gives different results, although not a problem in production (it will make your cache invalid though), for CI we test that we have stable keys (fingerprints) * fix: only the mini taxi file is on s3 for cost savings (2) * ci: skip notebooks that depend on the dataframe server * ci: skip ci steps in various old python versions * Bump micromamba and other actions * ci: specific test hangs on ci+osx * Bump cibuildwheel, use native arm64 mac runners * test: log is renamed to log loss * test: skip lightgbm tests on 36 and 37 * test: skip sklearn tests on 36 and 37 * Update packages/vaex-core/setup.py Co-authored-by: ddelange <14880945+ddelange@users.noreply.github.com> * chore: drop python 3.6 and 3.7 support Co-authored-by: Ewout ter Hoeven <E.M.terHoeven@student.tudelft.nl> * test: skip a failing test for windows * ci: macOS 11 is retired as of June 28 * ci: always build wheels, but do not publish instead * ci: try with older micromamba, 1.5.6 seems to sometimes hang * Install setuptools in wheel.yml * Add sudo * Fix windows * Use sudo only on macos * Fix empty string evaluating false * Add .readthedocs.yaml * Pull submodules * Try editable rtd install * Try move editable install to requirements_rtd.txt * Allow newer sphinx * Autocancel previous runs in PRs * Autocancel all jobs * Sphinx sidebar fix https://github.com/dmwyatt/sphinx-book-theme/blob/2416ef6cebc3d83019dbc83f25c61b72719cad55/docs/customize/sidebar-primary.md#default-sidebar-elements * Remove autocancel, doesn't work from forks * Add cancel-in-progress keys * Amend to only cancel on PRs * Add CIBW_TEST_COMMAND * Disallow numpy v2 * Skip musllinux due to misding blake3 wheels * Install carco for blake3 source install * Fix CIBW_ENVIRONMENT * Add CIBW_TEST_SKIP * Build wheels with numpy v1 * run tests on 3.10-3.12 * upgrade micromamba * unpin pytest-asyncio * try different pin as <2.0 because mamba crashes on that * Fix dephell and CI hell (ddelange#3) * allow for multiple fingerprints related to package versions * explicit dtype=object * fix pandas issues * revert graphene upgrade * force uv to ignore Werkzeug (we do not use it, its a subdependency which has conflicts) * fix: work with modern scipy/sparse arrays * skip test for python 3.8 * skip test on windows * add missing import * skip some tests conditionally * tuple comparison fix * does osx run without sourcing .bash profile? * skip a few more tests * only run test on linux * Try building arm64 wheels on macos-13 * Switch to older Xcode * Fix readthedocs by manually unpinning werkzeug in the graphene-tornado v2.6.1 release # for now we leave graphene-tornado / graphene on v2 # ref #2356 (comment) # in top level vaex[ci] we added the following (additional) direct reference requirement which adds one commit (ddelange/graphene-tornado@d75f01f) on top of the 2.6.1 release to unpin werkzeug # "graphene-tornado @ https://github.com/ddelange/graphene-tornado/archive/refs/heads/2.6.1.unpin-werkzeug.zip", * Simplify * Revert "Simplify" This reverts commit 91263bc. * Add back tags event trigger for core wheel upload * Switch to trusted publishing * Add trusted publishing for vaex-core * Exclude windows 3.8 from pythonpackage.yml * Don't upload vaex-core source distribution * Disable cp38-win vaex-core wheel build * Add permission --------- Co-authored-by: Jovan Veljanoski <jovan.veljanoski@tiqets.com> Co-authored-by: Maarten A. Breddels <maartenbreddels@gmail.com> Co-authored-by: Ewout ter Hoeven <E.M.terHoeven@student.tudelft.nl>
* Fix pythonpackage.yml failing on macos-13 * Trigger CI * Back to macos-13 for python 3.8 * Back to macos-latest * Build aarch64 linux wheels on macos-14 (M1) * Revert * Do not build musllinux_aarch64 wheels * Add comment, bring back cp39+ musllinux_aarch64
* Skip musllinux_aarch64 wheels * Build using backward-compatible numpy API (#5) * Build using backward-compatible numpy API * Add deprecated oldest-supported-numpy * Bring back cp39+ musllinux_aarch64 wheels * Note that numpy~=2.0 fails currently * Add explicit upper bound on python 3.12 * Quick fix for fingerprints * Add more fingerprints * Pin dask instead of adding fingerprints
* Fix timeout due to long blake3 build from source * Simplify * Remove QEMU * Fix -latest remnant * Fix typo * Bring back QEMU
* Fix missing long_description * Move publish into separate step * Fix * Bump publish action * Add comment
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- added test_weights_2d - interpolate marked as failing
Removing vaex.vaexfast.Error in favor of using std errors
[mutex.cc : 452] RAW: Lock blocking 0x6000037582b8 @ see tensorflow/tensorflow#98563 and issues linked in the discussion
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windows-latest 3.9 was resolving to s3fs 0.6.0
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When releasing a single package, other unchanged packages cause 400 errors when trying to upload duplicate sdists. Continue on error so the workflow succeeds when the target package uploads. Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
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