Skip to content

Conversation

@mossishahi
Copy link

generate_cell_boundaries method implemented under src/segger/geometry/boundaries.py and the linked to the cli API. Now user can generate segger_cell_boundaries.parquet by passing --save_cell_masks running segger

…t function.

The user can now pass --save_anndata to save anndata out of segmentation output
…ment function. The user can now pass --save_cell_masks to save cell boundary data from segmentation output.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant