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321 changes: 181 additions & 140 deletions packages/nightingale-manager/src/nightingale-manager.ts
Original file line number Diff line number Diff line change
Expand Up @@ -3,155 +3,196 @@ import NightingaleElement from "@nightingale-elements/nightingale-new-core";

@customElement("nightingale-manager")
class NightingaleManager extends NightingaleElement {
@property({
converter: {
fromAttribute: (value): Map<string, null> | null => {
if (!value) {
return null;
}
const attributes = value.split(",");
if (attributes.indexOf("type") !== -1)
throw new Error("'type' can't be used as a protvista attribute");
if (attributes.indexOf("value") !== -1)
throw new Error("'value' can't be used as a protvista attribute");
const mapToReturn = new Map(
attributes
.filter(
(attr: string) =>
!NightingaleManager.observedAttributes.includes(attr),
)
.map((attr: string) => [attr, null]),
);
return mapToReturn;
},
toAttribute: (value: []) => {
return value.join(",");
},
},
})
"reflected-attributes"?: Map<string, null> = new Map();

@property({ type: Number })
length?: number;

@property({ type: Number })
"display-start"?: number;

@property({ type: Number })
"display-end"?: number;

@property({ type: String })
"highlight"?: string;

@state()
protvistaElements = new Set<HTMLElement>();

@state()
propertyValues = new Map<string, string>();

connectedCallback() {
super.connectedCallback();
this.addEventListener("change", this.changeListener as EventListener);
this.style.display = "unset";
}

override attributeChangedCallback(
attr: string,
previousValue: string | null,
newValue: string | null,
) {
super.attributeChangedCallback(attr, previousValue, newValue);
this.applyAttributes();
}

applyAttributes() {
this.protvistaElements.forEach((element: HTMLElement) => {
this["reflected-attributes"]?.forEach((value, type) => {
if (value === false || value === null || value === undefined) {
element.removeAttribute(type);
@property({
converter: {
fromAttribute: (value): Map<string, null> | null => {
if (!value) {
return null;
}
const attributes = value.split(",");
if (attributes.indexOf("type") !== -1) throw new Error("'type' can't be used as a protvista attribute");
if (attributes.indexOf("value") !== -1) throw new Error("'value' can't be used as a protvista attribute");
const mapToReturn = new Map(attributes.filter((attr: string) => !NightingaleManager.observedAttributes.includes(attr)).map((attr: string) => [attr, null]));
return mapToReturn;
},
toAttribute: (value: []) => {
return value.join(",");
},
},
})
"reflected-attributes"?: Map<string, null> = new Map();

@property({ type: Number })
length?: number;

@property({ type: Number })
"display-start"?: number;

@property({ type: Number })
"display-end"?: number;

@property({ type: String })
"highlight"?: string;

@state()
protvistaElements = new Set<HTMLElement>();

@state()
propertyValues = new Map<string, string>();

connectedCallback() {
super.connectedCallback();
this.addEventListener("change", this.changeListener as EventListener);
document.addEventListener("click", this.handleDocumentClick.bind(this));
this.style.display = "unset";
}

override attributeChangedCallback(attr: string, previousValue: string | null, newValue: string | null) {
super.attributeChangedCallback(attr, previousValue, newValue);
this.applyAttributes();
}

applyAttributes() {
this.protvistaElements.forEach((element: HTMLElement) => {
this["reflected-attributes"]?.forEach((value, type) => {
if (value === false || value === null || value === undefined) {
element.removeAttribute(type);
} else {
element.setAttribute(type, typeof value === "boolean" ? "" : value);
}
});
// Default properties
if (this.length) {
element.setAttribute("length", `${this.length}`);
}
if (this["display-end"]) {
element.setAttribute("display-end", `${this["display-end"]}`);
}
if (this["display-start"]) {
element.setAttribute("display-start", `${this["display-start"]}`);
}
if (this.highlight) {
element.setAttribute("highlight", this.highlight);
}
});
}

register(element: NightingaleElement) {
this.protvistaElements.add(element);
this.applyAttributes();
}

unregister(element: NightingaleElement) {
this.protvistaElements.delete(element);
}

applyProperties(forElementId: string) {
if (forElementId) {
const element = this.querySelector(`#${forElementId}`) as HTMLElement;
if (!element) {
return;
}
this.propertyValues.forEach((value, type) => {
// eslint-disable-next-line @typescript-eslint/no-explicit-any
(element as any)[type] = value;
});
} else {
element.setAttribute(type, typeof value === "boolean" ? "" : value);
this.protvistaElements.forEach((element: HTMLElement) => {
if (!element) {
return;
}
this.propertyValues.forEach((value, type) => {
// eslint-disable-next-line @typescript-eslint/no-explicit-any
(element as any)[type] = value;
});
});
}
});
// Default properties
if (this.length) {
element.setAttribute("length", `${this.length}`);
}
if (this["display-end"]) {
element.setAttribute("display-end", `${this["display-end"]}`);
}
if (this["display-start"]) {
element.setAttribute("display-start", `${this["display-start"]}`);
}
if (this.highlight) {
element.setAttribute("highlight", this.highlight);
}
});
}

register(element: NightingaleElement) {
this.protvistaElements.add(element);
this.applyAttributes();
}

unregister(element: NightingaleElement) {
this.protvistaElements.delete(element);
}

applyProperties(forElementId: string) {
if (forElementId) {
const element = this.querySelector(`#${forElementId}`) as HTMLElement;
if (!element) {
return;
}
this.propertyValues.forEach((value, type) => {
// eslint-disable-next-line @typescript-eslint/no-explicit-any
(element as any)[type] = value;
});
} else {
this.protvistaElements.forEach((element: HTMLElement) => {
if (!element) {
return;
}

isRegisteredAttribute(attributeName: string) {
if (!this["reflected-attributes"]) {
return false;
}
this.propertyValues.forEach((value, type) => {
// eslint-disable-next-line @typescript-eslint/no-explicit-any
(element as any)[type] = value;
});
});
return [...this["reflected-attributes"].keys()].includes(attributeName) || NightingaleManager.observedAttributes.includes(attributeName);
}
}

isRegisteredAttribute(attributeName: string) {
if (!this["reflected-attributes"]) {
return false;
// This function is the click listener for the entire document - responsible for closing tooltips and de-highlighting
handleDocumentClick(event: MouseEvent) {
const isClickInsideFeatureOrTooltip = event.composedPath().some((element) => {
const el = element as HTMLElement;
return el.classList?.contains("outer-rectangle") || (el.nodeType === Node.ELEMENT_NODE && (el as HTMLElement).closest("nightingale-tooltip"));
});

// If click occurs outside of tooltip or feature track, remove and de-highlight
if (!isClickInsideFeatureOrTooltip) {
const tooltip = this.querySelector("nightingale-tooltip");
if (tooltip) {
const tooltipElement = tooltip.shadowRoot?.querySelector(".tooltip");
if (tooltipElement && !tooltipElement.contains(event.target as Node)) {
(tooltip as any).hideTooltip();
this.highlight = "null";
this.applyAttributes();
}
}
}
}
return (
[...this["reflected-attributes"].keys()].includes(attributeName) ||
NightingaleManager.observedAttributes.includes(attributeName)
);
}

changeListener(e: CustomEvent) {
if (!e.detail) {
return;

handleTrackClick(event: CustomEvent) {
if (event.detail?.eventType === "click") {
event.stopPropagation(); // Prevent event from bubbling up to document
const tooltip = this.querySelector("nightingale-tooltip");

if (!tooltip) {
console.error("Tooltip element not found in the DOM.");
return;
}

const [x, y] = event.detail.coords;

// Ensure `showTooltip` exists on the element
if (typeof (tooltip as any).showTooltip === "function") {
let feature = event.detail.feature;
if (feature) {
(tooltip as any).showTooltip(
x,
y,
{
description: feature.description || "Random description",
evidence: feature.evidence || "Random evidence",
},
feature.accession
);

this.highlight = event.detail.highlight;
}
} else {
console.error("Tooltip element does not have a showTooltip method.");
}
}
}
switch (e.detail.handler) {
case "property":
this.propertyValues.set(e.detail.type, e.detail.value);
this.applyProperties(e.detail.for);
break;
default:
if (this.isRegisteredAttribute(e.detail.type)) {
this["reflected-attributes"]?.set(e.detail.type, e.detail.value);

changeListener(e: CustomEvent) {
if (!e.detail) {
return;
}
switch (e.detail.handler) {
case "property":
this.propertyValues.set(e.detail.type, e.detail.value);
this.applyProperties(e.detail.for);
break;
default:
if (this.isRegisteredAttribute(e.detail.type)) {
this["reflected-attributes"]?.set(e.detail.type, e.detail.value);
}
Object.keys(e.detail).forEach((key) => {
if (this.isRegisteredAttribute(key)) {
this["reflected-attributes"]?.set(key, e.detail[key]);
}
});
this.handleTrackClick(e);
this.applyAttributes();
}
Object.keys(e.detail).forEach((key) => {
if (this.isRegisteredAttribute(key)) {
this["reflected-attributes"]?.set(key, e.detail[key]);
}
});
this.applyAttributes();
}
}
}

export default NightingaleManager;
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