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1. good-protocols good-protocols Public

   Forked from goodest-goodlab-org/good-protocols

   A space for Good lab members to document their pipelines and protocols.

2. core core Public

   Forked from gwct/core

   My personal core functions and scripts for manipulating sequence data, phylogenetic trees, and other things.

   Python

3. cis-trans-pipeline cis-trans-pipeline Public

   R

4. modified-AmpliCoNE modified-AmpliCoNE Public

   This is a modification to the AmpliCoNE tool: https://github.com/makovalab-psu/AmpliCoNE-tool

   Python

5. mus_spermatogenesis_analyses mus_spermatogenesis_analyses Public

   Scripts I used for Mus spermatogenesis molecular evolution analyses in Kopania et al.

   R

6. xy_mismatch_expression_analyses xy_mismatch_expression_analyses Public

   Scripts used for gene expression analyses in XY mismatch mice

   R