v1.0

HyphTracker Release:

Home Page

Previous Analyses

New Analysis Screen (upload file, select magnification level, filter type, and sensitivity)

The before image (large files, many frames as time points)

Zoom in on ONE FRAME of the area of interest

Each frame is skeletonized and the hyphae tips are extracted

Many metrics, including branching rate (seen below) are recorded (complete list in README)

Every frame is also skeletonized/filtered and attached in outputs as well.