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12 changes: 12 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -2,6 +2,18 @@

All notable changes to this project will be documented in this file.

## [0.13.0](https://github.com/fiberseq/fibertools-rs/compare/v0.12.1...v0.13.0) - 2026-08-13

### Fixed

- [**breaking**] write MA-family tags as Ma/Aq/An (SAM local-use spelling) + legacy-tag hygiene ([#124](https://github.com/fiberseq/fibertools-rs/pull/124))
- make the Read the Docs (py-ft) build independent of the pyft Rust build ([#127](https://github.com/fiberseq/fibertools-rs/pull/127))
- MA-refactor fallout β€” qc, track-decorators, filter expressions, mock-fire ([#123](https://github.com/fiberseq/fibertools-rs/pull/123))

### Other

- cache cargo artifacts, parallelize jobs and tests ([#128](https://github.com/fiberseq/fibertools-rs/pull/128))

## [0.12.1](https://github.com/fiberseq/fibertools-rs/compare/v0.12.0...v0.12.1) - 2026-08-13

### Fixed
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4 changes: 2 additions & 2 deletions Cargo.lock

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4 changes: 2 additions & 2 deletions Cargo.toml
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Expand Up @@ -10,7 +10,7 @@ license = "MIT"
name = "fibertools-rs"
readme = "README.md"
repository = "https://github.com/fiberseq/fibertools-rs"
version = "0.12.1"
version = "0.13.0"
# exclude py-ft and test data from cargo publish since they are too large
exclude = ["py-ft/", "tests/data/", "Train-FIRE/"]

Expand All @@ -26,7 +26,7 @@ rust-htslib = "0.46"
# published fibertools-rs manifest. For 0.0.x crates a caret requirement is an
# exact pin (^0.0.1 == 0.0.1), so this welds each fibertools-rs release to the
# specific molecular-annotation release it was built against.
molecular-annotation = { path = "molecular-annotation", version = "0.0.2" }
molecular-annotation = { path = "molecular-annotation", version = "0.0.3" }

[[bin]]
name = "ft"
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8 changes: 8 additions & 0 deletions molecular-annotation/CHANGELOG.md
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Expand Up @@ -7,6 +7,14 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

## [Unreleased]

## [0.0.3](https://github.com/fiberseq/fibertools-rs/compare/molecular-annotation-v0.0.2...molecular-annotation-v0.0.3) - 2026-08-13

### Fixed

- [**breaking**] write MA-family tags as Ma/Aq/An (SAM local-use spelling) + legacy-tag hygiene ([#124](https://github.com/fiberseq/fibertools-rs/pull/124))
- leading soft clips double-counted in pyMA liftover ([#126](https://github.com/fiberseq/fibertools-rs/pull/126))
- MA-refactor fallout β€” qc, track-decorators, filter expressions, mock-fire ([#123](https://github.com/fiberseq/fibertools-rs/pull/123))

## [0.0.2](https://github.com/fiberseq/fibertools-rs/compare/molecular-annotation-v0.0.1...molecular-annotation-v0.0.2) - 2026-07-21

### Added
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2 changes: 1 addition & 1 deletion molecular-annotation/Cargo.toml
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@@ -1,6 +1,6 @@
[package]
name = "molecular-annotation"
version = "0.0.2"
version = "0.0.3"
edition = "2021"
description = "Library for molecular annotations in SAM/BAM files"
license = "MIT"
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