ci: cache cargo artifacts, parallelize jobs and tests - #128
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- Swatinem/rust-cache in the compiling jobs: every run previously cold-compiled the full dependency tree (including rust-htslib's C build) three times. - Drop 'needs: Formatting' so Testing no longer queues behind a 10-second job. - Drop --test-threads=1: it dates to the original 2022 CI template, predating the tempfile-based regression harness; current tests are parallel-safe (unique tempfiles, read-only fixtures). - Replace archived actions-rs/toolchain with dtolnay/rust-toolchain and bump checkout to v4. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
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## 🤖 New release * `molecular-annotation`: 0.0.2 -> 0.0.3 (✓ API compatible changes) * `fibertools-rs`: 0.12.1 -> 0.13.0 (✓ API compatible changes) <details><summary><i><b>Changelog</b></i></summary><p> ## `molecular-annotation` <blockquote> ## [0.0.3](molecular-annotation-v0.0.2...molecular-annotation-v0.0.3) - 2026-08-13 ### Fixed - [**breaking**] write MA-family tags as Ma/Aq/An (SAM local-use spelling) + legacy-tag hygiene ([#124](#124)) - leading soft clips double-counted in pyMA liftover ([#126](#126)) - MA-refactor fallout — qc, track-decorators, filter expressions, mock-fire ([#123](#123)) </blockquote> ## `fibertools-rs` <blockquote> ## [0.13.0](v0.12.1...v0.13.0) - 2026-08-13 ### Fixed - [**breaking**] write MA-family tags as Ma/Aq/An (SAM local-use spelling) + legacy-tag hygiene ([#124](#124)) - make the Read the Docs (py-ft) build independent of the pyft Rust build ([#127](#127)) - MA-refactor fallout — qc, track-decorators, filter expressions, mock-fire ([#123](#123)) ### Other - cache cargo artifacts, parallelize jobs and tests ([#128](#128)) </blockquote> </p></details> --- This PR was generated with [release-plz](https://github.com/release-plz/release-plz/). Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
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Four low-risk CI speedups: Swatinem/rust-cache in the compiling jobs (every run previously cold-compiled the full dep tree, including rust-htslib's C build, in both Linting and Testing); remove
needs: Formattingso Testing runs in parallel instead of queueing behind a 10-second job; remove--test-threads=1(it dates to the original 2022 CI template, pre-dating the tempfile-based regression harness — current tests use unique tempfiles and read-only fixtures and run parallel-clean locally); replace the archivedactions-rs/toolchainwithdtolnay/rust-toolchainand bump checkout to v4. Expected effect: warm-cache Testing drops from ~7min to ~2–3min, and total PR wall-clock roughly halves. This PR's own run is the cache-priming (cold) run; the next PR shows the real timing.🤖 Generated with Claude Code