Fix 'flan global prepare' and 'global fit' pipeline execution errors - #4

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TheVidz wants to merge 12 commits into

genxnetwork:mainfrom

Commits on Mar 30, 2026

fix naming issue deep_ancestry, redirecting to flan
TheVidz
committed
9e38946
error in qc.py file causing issue on "prepare"
TheVidz
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242990b
fix num folds error in sample_splitter
TheVidz
committed
e9e9d8a

Commits on Mar 31, 2026

Fixing Error: --read-freq variant ID '.' appears multiple times
TheVidz
committed
a339c66

Commits on May 24, 2026

revert commit a339c66
TheVidz
committed
e0d0bd1
coment-out commit e9e9d8a
TheVidz
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ffa8170
revert commit 242990b
TheVidz
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2de0dc6

Commits on Jun 6, 2026

Commits on Jun 10, 2026

change to relative paths instead of absolute, for fix for 'server prepare'
TheVidz
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3b4ce34