Integration of single-cell multi-omic data with graph-based topic modelling
Gabriele Malagoli, Filippo Valle, Andreina Tirabassi, Annalisa Marsico, Loredana Martignetti, Michele Caselle & Maria Colomé-Tatché
https://doi.org/10.64898/2026.02.25.707947
conda create --name gt -c conda-forge graph-tool
conda activate gt
pip install git+https://github.com/gmalagol10/bionsbm
import bionsbm
from muon import read_h5mu
mdata = read_h5mu("Test_data.h5mu")
model = bionsbm.model.bionsbm(obj=mdata, saving_path="results/mybionsbm")
model.fit(n_init=1, verbose=False)
- 0.1
- Initial Release
This project is licensed under the GNU General Public License v3.0 - see the LICENSE.md file for details