fornac-cmd

Commandline tool to generate RNA structure plot SVGs using forna container and phantomjs

Installation

You need NodeJS and npm installed. As requrement install phantomjs:

npm install phantomjs

Usage

phantomjs generator.js "CGCUUCAUAUAAUCCUAAUGACCUAU" "((..((....)).(((....))).))" > plot.svg

This outputs the svg file after a certain rendering time to the specified destination.