This repository contains code and data for reference preparation of various projects. Current projects:
- PerSeqPIPE: bioinformatic pipeline for analysis of small non-coding RNAs using sequence-centric approach
docker/folder contains Dockerfile and Makefile that builds docker image used to prepare various databases and subsequently final custom sncRNA GTF file for PerSeqPIPE pipelinescripts/folder contains simple scripts that prepare various databases for PerSeqPIPE pipeline as described here