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Clean up redundant test programs and duplicate documentation#2

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lee101 wants to merge 5 commits into
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codex/16-ok-lets-hmm-cleanup-some
Open

Clean up redundant test programs and duplicate documentation#2
lee101 wants to merge 5 commits into
mainfrom
codex/16-ok-lets-hmm-cleanup-some

Update cleanup summary with benchmark status and next steps

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