Bump nibabel from 5.3.2 to 5.4.2 in /scripts

[dependabot]

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Bumps nibabel from 5.3.2 to 5.4.2.

Release notes

Sourced from nibabel's releases.

5.4.1

Release notes

Bug-fix release in the 5.4.x series.

This release addresses test failures on shallow clones or when run with python -m pytest in Python 3.14+.

Bug fixes

• Adjust tests to not depend on how pytest is run, or deep clones (#1478) (CM)

Maintenance

• Consolidate environment management for development tasks to ensure tox and pre-commit stay in sync. (#1475) (CM, reviewed by Rémi Gau)
• Update pre-commit and ruff configurations (#1467) (Rémi Gau, reviewed by CM)

New Contributors

• @​Remi-Gau made their first contribution in nipy/nibabel#1467

Full Changelog: nipy/nibabel@5.4.0...5.4.1

5.4.0

Release notes

New feature release in the 5.4.x series.

This release requires a minimum Python of 3.10 and NumPy 1.25, and has been tested up to Python 3.14 and NumPy 2.4.

New features

• Add mode parameter to nibabel.processing.conform (#1396) (Clorindo Notte, reviewed by CM)

Enhancements

• Label image axes consistently in cases of extreme obliquity (#1450) (Leonardo Ayala, reviewed by CM)
• Use compressionzstd or backports.zstd in preference to pyzstd (#1444) (PM, reviewed by CM)
• Support PAR/REC files generated by Philips R11 consoles (#1430) (Alex Daniel, reviewed by CM)
• Add stub file for top-level nibabel module, improving support in code analyzers (#1436) (Jon Cluce, reviewed by CM)
• Use informative error message for missing file attribute in TCKFile header (#1422) (Jon Haitz Legarreta Gorroño, reviewed by CM)
• Support ushort datatypes in MGH/MGZ files (#1415) (Benjamin Thyreau, reviewed by CM)
• Simplify nibabel.cmdline.utils.table2string implementation (#1403) (CM)

Bug fixes

• Fix type-checking errors in nibabel.volumeutils.rec2dict (#1424) (Jon Haitz Legarreta Gorroño, reviewed by CM)
• Adapt to functools.partial becoming a method descriptor in Python 3.14 (#1391) (Benjamin Beasley, reviewed by CM)

Maintenance

... (truncated)

Changelog

Sourced from nibabel's changelog.

5.4.2 (Wednesday 11 March 2026)

Bug-fix release in the 5.4.x series.

This release fixes an issue with automated deployment to PyPI.

5.4.1 (Tuesday 10 March 2026)

Bug-fix release in the 5.4.x series.

This release addresses test failures on shallow clones or when run with python -m pytest in Python 3.14+.

Bug fixes

• Adjust tests to not depend on how pytest is run, or deep clones (pr/1478) (CM)

Maintenance

• Consolidate environment management for development tasks to ensure tox and pre-commit stay in sync. (pr/1475) (CM, reviewed by Rémi Gau)
• Update pre-commit and ruff configurations (pr/1467) (Rémi Gau, reviewed by CM)

5.4.0 (Monday 2 March 2026)

New feature release in the 5.4.x series.

This release requires a minimum Python of 3.10 and NumPy 1.25, and has been tested up to Python 3.14 and NumPy 2.4.

New features

• Add mode parameter to :func:nibabel.processing.conform (pr/1396) (Clorindo Notte, reviewed by CM)

Enhancements

• Label image axes consistently in cases of extreme obliquity (pr/1450) (Leonardo Ayala, reviewed by CM)
• Use :mod:compression.zstd or backports.zstd in preference to pyzstd (pr/1444) (PM, reviewed by CM)
• Support PAR/REC files generated by Philips R11 consoles (pr/1430) (Alex Daniel, reviewed by CM)
• Add stub file for top-level nibabel module, improving support in code analyzers (pr/1436) (Jon Cluce, reviewed by CM)
• Use informative error message for missing file attribute in :class:~nibabel.streamlines.tck.TCKFile header (pr/1422)

... (truncated)

Commits

• 513f421 rel: 5.4.2
• cc4fa26 chore(ci): Use non-slim runner for package deployment
• 553a3d4 doc: Add missing changelog entries
• 5054e90 rel: 5.4.1
• 9f78e47 Merge pull request #1478 from effigies/fix/python-m-pytest
• d8653ec test: Skip removalschedule tests on shallow checkouts
• 719b5f9 fix: Ignore executable name in checking for usage output
• 84a6956 chore(ci): Add python -m pytest test
• db76723 Merge pull request #1475 from effigies/chore/consistency
• 94df062 chore: Use uv more consistently
• Additional commits viewable in compare view

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[lev1nson]

Superseded by b3df585, which pins the same version and tests it on Python 3.12, 3.13, and 3.14.

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