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Remove Snakemake template files, update README Tests #22: Commit 5ddca11 pushed by liezeltamon
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Update Tests #21: Commit c8915a8 pushed by liezeltamon
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Modify to run full dataset Tests #20: Commit ece2bed pushed by liezeltamon
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Update authors section in README.md Tests #19: Commit c2e29d7 pushed by liezeltamon
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Update workflow description in README.md Tests #18: Commit accd63c pushed by liezeltamon
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Update README.md Tests #17: Commit 91ec2f3 pushed by liezeltamon
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Rerun with changes Tests #16: Commit 9d3faff pushed by liezeltamon
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Fix input of so the whole pipeline runs correctly Tests #15: Commit 3dc8f0a pushed by liezeltamon
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Run on all data so far including batch 4 Tests #14: Commit cf874e3 pushed by liezeltamon
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Add working version but restricted for now to h5 file as input, need … Tests #13: Commit 1a7355f pushed by liezeltamon
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Add global variable to specify where the raw counts matrix is, run on… Tests #12: Commit aac76c1 pushed by liezeltamon
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Add working version of complete workflow Tests #11: Commit 30a0459 pushed by liezeltamon
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Split qc_sc.R into per sample and aggregate scripts for Snakemake, ag… Tests #10: Commit 1c3a738 pushed by liezeltamon
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Add tested and working version until filter_conventional Tests #9: Commit a96d4cd pushed by liezeltamon
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Add working version of empty.smk using main Snakefile Tests #8: Commit 36da7de pushed by liezeltamon
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Add individually tested scripts for pipelining Tests #7: Commit 0aa1dc8 pushed by liezeltamon
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Update description, create output dir Tests #6: Commit a9c0d36 pushed by liezeltamon
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Wrap code to load sc data into a helper function Tests #5: Commit 7e5a804 pushed by liezeltamon
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Add working version Tests #4: Commit f84568c pushed by liezeltamon
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Fix Tests #3: Commit e615813 pushed by liezeltamon
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Add initial version of snakefile, config and script Tests #2: Commit 62a5030 pushed by liezeltamon
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Initial commit Tests #1: Commit 4a1a776 pushed by liezeltamon
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