docs: sync ensure_deps/Laminar/Harbor gaps and #112 complexity + tracing CI - #113
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Document observability/tracing architecture, JsonLines shared reader, Harbor packaging pointer, suite 746, and ensure_deps troubleshooting. Deduplicate complexity-gate rows and fix CLAUDE.md SPEC count to S42. Co-authored-by: Michelle Rojas <mrojas54@users.noreply.github.com>
#104 removed logfire from the uv dev group; sync AGENTS/SPEC/EVALUATION/ BUILDPLAN to match pyproject.toml. Point Tone artifacts at S1–S42. Co-authored-by: Michelle Rojas <mrojas54@users.noreply.github.com>
Map the #107 passive.main / _resolve_corpus phase helpers for navigability and point at tests/test_shell_safety.py. No CLI surface change. Co-authored-by: Michelle Rojas <mrojas54@users.noreply.github.com>
Sync operator docs with PR #112: DEFAULT_THRESHOLD is the only complexity budget (no inert mccabe decoration), CI runs a separate tracing lane so lmnr-guarded tests cannot silently skip, and suite counts refresh to 747/4 (default) and 748/3 (with --extra tracing). Co-authored-by: Michelle Rojas <mrojas54@users.noreply.github.com>
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Summary
Documentation-only PR to catch operator docs up with shipped code on
main.Cherry-picks the verified #111 tip (covering #99–#107 gaps that never merged) onto current
main, then documents PR #112.Docs added/updated
README.md,AGENTS.md,SPEC.md,EVALUATION.md,BUILDPLAN.md,CLAUDE.mddocs/superpowers/specs/2026-07-12-complex-debug-probe-design.mddocs/superpowers/specs/2026-07-15-tech-debt-cicd-routine-design.mdsequence/research/dossier.md,sequence/run-state.mdCodepaths covered
complex_runner.ensure_depsSHA pin + wipe residual (fix(complex): pin ensure_deps to manifest SHA, not corpus HEAD #99; fix(complex): invalidate dep cache when manifest SHA changes #102 still open)TOOLBENCH_TRACING=1+tracingextra; Make CLI tracing explicitly opt in #104)transcript.JsonLines+ passive named phases +test_shell_safety.py(refactor: close the Medium tech-debt findings from 20260803 #107)complexity_gate.DEFAULT_THRESHOLDas sole complexity budget (no inert[tool.ruff.lint.mccabe]); CItracingjob so lmnr-guarded tests cannot silently skipKnowledge gaps addressed
pyproject.tomlmccabe config--extra tracingVerification
Facts checked against
pyproject.toml,complexity_gate.py,.github/workflows/ci.yml, and a freshuv run pytest -q(with and without--extra tracing). Docs-only; no code changes.