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Graph invariant fix #19

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Graph invariant fix #19

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455f04b
fix with some tests for issue #4, #3, #7, needs evaluation
tylerperyea Feb 12, 2019
71b8ebf
allow symmetrical isotopic structure to be consistent at layer 3
tylerperyea Apr 11, 2019
0f04c86
commented out unfinished test
tylerperyea Apr 11, 2019
7391993
removing extra symmetry features
tylerperyea Apr 11, 2019
930162d
reverted version
tylerperyea Apr 11, 2019
3fe79e3
added another test case
tylerperyea Apr 11, 2019
7ec4072
updated logic for tie-breaking on graph invarient collision
tylerperyea Apr 12, 2019
c2b300e
changed comment
tylerperyea Apr 12, 2019
4297bf8
added make bash script
tylerperyea Apr 12, 2019
9558e17
changed tie-breaking to be more explicitly consistent with previous m…
tylerperyea Apr 15, 2019
9954331
merged with other update
tylerperyea Apr 16, 2019
b80b4cc
updated version number
tylerperyea Apr 16, 2019
15bd305
removed non-symmetry fix components
tylerperyea Apr 16, 2019
3105bb4
added test case
tylerperyea Apr 17, 2019
1e7b83a
Merge branch 'temp' into symmetryHandle
tylerperyea Apr 17, 2019
0f1b3b4
added back in graph invarient tie-breaking fix
tylerperyea May 1, 2019
2926b8b
fixed version
tylerperyea May 1, 2019
7f66a2a
Merge pull request #17 from ncats/symmetryHandle
tylerperyea May 1, 2019
16a28c2
fix for graph invarient issue on layer-3
tylerperyea May 2, 2019
000119f
incremented version to 0.6.0
tylerperyea May 2, 2019
a1cd347
updated graph invariant to be morgan's
tylerperyea May 2, 2019
2957434
added tests
tylerperyea May 2, 2019
eb5f028
basic code that may be used later
tylerperyea May 2, 2019
a963b98
changing to lazier layer computation using morgan's and simplified mo…
tylerperyea May 3, 2019
d3b8afe
fixed symmetry check for cages
tylerperyea May 8, 2019
4bd471d
update to text layout
tylerperyea May 13, 2019
851b997
change SSSR heuristic calculator
tylerperyea May 14, 2019
65eabec
Merge remote-tracking branch 'remotes/origin/master' into graphInvari…
dkatzel-ncats Nov 13, 2019
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3 changes: 3 additions & 0 deletions make.sh
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Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
bash mavenMake.sh
mvn clean package

4 changes: 2 additions & 2 deletions pom.xml
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Expand Up @@ -7,7 +7,7 @@
<groupId>gov.nih.ncats</groupId>
<artifactId>lychi</artifactId>
<packaging>jar</packaging>
<version>0.7.0</version>
<version>0.7.1</version>
<name>Lychi</name>

<repositories>
Expand Down Expand Up @@ -51,7 +51,7 @@
</dependencies>

<build>

<finalName>${project.artifactId}-${project.version}</finalName>
<outputDirectory>${deploy.dir}</outputDirectory>
<plugins>
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