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Dev preprocessing
…update channels / dataflow between modules
…formating config file
Major Update tests are failing because test profile hasn't been set up yet
…nel + samplsheet from list with nf-schema
nf-tests for modules
new module and subworkflow test
New functions
updated test profile and docs
Adding review suggestions
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Adding Review feedback
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
adding review suggestions
update ara subworkflow
mashehu
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Apr 14, 2026
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mashehu
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Changes look good! Will close this now and give ✅ on the release PR.
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Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Do not merge! This is a PR of
devcompared to theTEMPLATEbranch for whole-pipeline reviewing purposes. Changes should be made todevand this PR should not be merged!