Create openalea_ci.yml

.github/workflows/openalea_ci.yml

@@ -0,0 +1,23 @@
+name: OpenAlea CI
+
+on:
+  push:
+    branches:
+      - main
+      - master
+    tags:
+      - 'v*'
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+  release:
+    types:
+      - published
+
+jobs:
+  build:
+    uses: openalea/action-build-publish-anaconda/.github/workflows/openalea_ci.yml@main
+    secrets:
+      anaconda_token: ${{ secrets.ANACONDA_TOKEN }}

conda/meta.yaml

@@ -1,46 +1,56 @@
 {% set pyproject = load_file_data('../pyproject.toml', from_recipe_dir=True) %}
+{% set name = pyproject.get('project').get('name') %}
+{% set description = pyproject.get('project').get('description') %}
+{% set version = environ.get('SETUPTOOLS_SCM_PRETEND_VERSION', "2.4.4.dev") %}
+{% set license = pyproject.get('project').get('license') %}
+{% set home = pyproject.get('project', {}).get('urls', {}).get('Homepage', '') %}
+{% set build_deps = pyproject.get("build-system", {}).get("requires", []) %}
+{% set deps = pyproject.get('project', {}).get('dependencies', []) %}
+{% set conda_deps = pyproject.get('tool', {}).get('conda', {}).get('environment', {}).get('dependencies',[]) %}
+
 
 package:
-  name: {{ pyproject["project"]["name"] }}
-  version: {{ GIT_DESCRIBE_TAG  | replace("v", "") }}
+  name: {{ name }}
+  version: {{ version }}
 
 source:
   path: ..
 
 build:
   noarch: python
-  number: 0
-  script: {{PYTHON}} -m pip install . -vv
+  string: py{{ PY_VER }}
+  preserve_egg_dir: True
+  # pip install options mainly ensure that dependencies are handled by conda (and not pip)
+  # --no-deps ensure pip will not install deps not declared in meta.yaml (but declared in pyproject.toml)
+  # --no-build-isolation ensure pip will not replace build deps declared in meta.yaml (and declared in pyproject.toml)
+  # --ignore-installed ensure that compiled files (accidentally present in sources or uncleaned locally) will be overwritten
+  script: {{ PYTHON }} -m pip install . --no-deps --ignore-installed --no-build-isolation -vv
 
 requirements:
-  build:
-    - python {{ pyproject["project"]["requires-python"] }}
-    {% for dep in pyproject["build-system"]["requires"] %}
-    - {{ dep.lower() }}
-    {% endfor %}
+  host:
+    - python
+    {% for dep in build_deps %}
+    - {{ dep }}
+    {% endfor  %}
 
   run:
-    - python {{ pyproject["project"]["requires-python"] }}
-    {% for dep in pyproject["project"]["dependencies"] %}
-    - {{ dep.lower() }}
-    {% endfor %}
-    {% for dep in pyproject["tool"]["conda"]["environment"]["dependencies"] %}
-    - {{ dep.lower() }}
+    - python
+    {% for dep in deps + conda_deps %}
+    - {{ dep }}
     {% endfor %}
 
 test:
   requires:
     - pytest
+    - setuptools
   imports:
     - openalea.core
   source_files:
-    - test/**
-    - test/data/**
+    - test/test_*.py
   commands:
-    - cd test
-    - pytest -v test_*.py
+   - pytest -v
 
 about:
-  summary: {{ pyproject["project"]["description"] }}
-  license: {{ pyproject["project"]["license"] }}
-  home: {{ pyproject["project"]["urls"]["Homepage"] }}
+  home: {{ home }}
+  license: {{ license }}
+  summary: {{ description }}

pyproject.toml

@@ -14,6 +14,9 @@ where = ["src"]
 # enable dynamic versioning based on git tags
 [tool.setuptools_scm]
 # can be empty if no extra settings are needed, presence enables setuptools-scm
+fallback_version = "2.4.4.dev0"
+version_scheme = "guess-next-dev"
+local_scheme = "no-local-version"
 
 [project]
 name = "openalea.core"
@@ -61,10 +64,12 @@ dependencies = [
 [project.optional-dependencies]
 test = ["pytest"]
 doc = [
-  "sphinx-favicon",
-  "sphinx-rtd-theme",
   "pydata-sphinx-theme",
   "myst-parser",
+  "sphinx-favicon",
+  "ipykernel",
+  "sphinx-copybutton",
+  "ipython_genutils",
   "nbsphinx",
 ]