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@EpiCompBio Epidemiology and Computational Biology

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    14 repositories

    • stats_utils

      Public
      Collection of utility scripts for common statistical routines
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 18, 2020May 18, 2020

    • pipeline_GWAS

      Public
      Python
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Apr 2, 2020Apr 2, 2020

    • genotype_QC_lite

      Public
      CSS
      •0•0•3•0•Updated Feb 26, 2020Feb 26, 2020

    • genotype_QC

      Public
      Genotype QC ruffus/CGAT style pipeline for thousands of markers and thousands of samples
      Python
      •
      GNU General Public License v3.0
      •1•3•0•0•Updated Feb 26, 2020Feb 26, 2020

    • welcome

      Public
      Welcome, general notes, explanations, and the like for the EpiComBio group
      GNU General Public License v3.0
      •0•1•0•0•Updated Feb 26, 2020Feb 26, 2020

    • bgwas3

      Public
      CSS
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Sep 8, 2019Sep 8, 2019

    • bigimp

      Public
      Make imputation of large datasets easier
      rimputationepidemiology
      rimputationepidemiology
      R
      •
      GNU General Public License v3.0
      •0•0•5•0•Updated Jul 5, 2019Jul 5, 2019

    • pipeline_QTL

      Public
      R
      •
      GNU General Public License v3.0
      •1•1•1•0•Updated Jul 5, 2019Jul 5, 2019

    • Barracudas

      Public
      Translational project
      R
      •0•0•0•0•Updated May 7, 2019May 7, 2019

    • downstream_annotation

      Public
      Wrappers and utilities for annotating results from GWAS and QTL studies
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 12, 2018Sep 12, 2018

    • allele_dosgae_python

      Public
      Python
      •0•0•0•0•Updated Jul 27, 2017Jul 27, 2017

    • Matlab-Tools

      Public
      MATLAB
      •0•0•0•0•Updated Mar 16, 2017Mar 16, 2017

    • genetic_association

      Public
      Pipeline for genetic association analysis
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 18, 2017Jan 18, 2017

    • test_repo

      Public
      Repository for testing
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 24, 2016Nov 24, 2016
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