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    13 repositories

    • BMDx

      Public
      R
      •
      GNU General Public License v3.0
      •3•3•0•0•Updated Nov 5, 2024Nov 5, 2024

    • GARBO

      Public
      GARBO, a novel multi-island adaptive Genetic AlgoRithm for biomarker selection in high-dimensional Omics data.
      Python
      •
      GNU General Public License v3.0
      •3•5•0•0•Updated Nov 5, 2024Nov 5, 2024

    • INfORM

      Public
      A new tool for Inference of NetwOrk Response Modules
      R
      •
      GNU General Public License v3.0
      •6•2•0•1•Updated Jan 31, 2022Jan 31, 2022

    • eUTOPIA

      Public
      eUTOPIA: solUTion for Omics data PreprocessIng and Analysis
      R
      •
      GNU General Public License v3.0
      •3•4•2•0•Updated Jan 11, 2022Jan 11, 2022

    • FunMappOne

      Public
      FunMappOne: a tool to summarize and visually navigate functional categories in multiple experiments.
      visualizationfunctionalannotationssummarizationgeneontologyreactome-pathwaypathway-enrichment-analysis
      R
      •
      GNU Affero General Public License v3.0
      •3•6•4•0•Updated Dec 14, 2021Dec 14, 2021

    • RepAn

      Public
      Analysis functions for deep sequenced immune repertoire (Repseq) datasets in R
      R
      •3•2•0•0•Updated Jul 22, 2020Jul 22, 2020

    • psoriasis-dermatitis-analysis

      Public
      Scripts and procedure fo psoriasis and atopic dermatitis transcriptomic analyses
      R
      •1•2•0•0•Updated Jul 8, 2020Jul 8, 2020

    • TinderMIX

      Public
      TinderMIX: Time-Dose INtegrated moDelling of toxicogenomics data
      R
      •
      GNU General Public License v3.0
      •3•0•0•0•Updated Apr 27, 2020Apr 27, 2020

    • CpGmotifs

      Public
      A user-friendly graphical interface that allows searching and visualising motifs linked to CpG sites from differential methylation analyses.
      R
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Mar 27, 2020Mar 27, 2020

    • FunMapponePackage

      Public
      0•0•0•0•Updated Nov 28, 2019Nov 28, 2019

    • INSIdEnano

      Public
      INSIdE nano is a web-based tool that highlights connections between phenotypic entities based on their effects on genes. The database behind the INSIdE nano is a network whose nodes are grouped into four categories: Nanomaterial exposures Drug treatments Chemical exposures Diseases For each node in the network, information regarding their effect…
      0•1•0•0•Updated Mar 10, 2019Mar 10, 2019

    • MVDA_package

      Public
      Multi-view clustering methodology in which the information from different data layers (views) is integrated at the levels of the results of each single view clustering iterations.
      R
      •3•0•0•0•Updated Feb 28, 2019Feb 28, 2019

    • MaNGA

      Public
      MaNGA is a multi-niche/multi-objective genetic algorithm for QSAR modelling, that simultaneously enables stable feature selection as well as obtaining robust and validated regression models with maximized applicability domain.,
      Python
      •2•0•0•0•Updated Feb 18, 2019Feb 18, 2019