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    5 repositories

    • LeafRank

      Public
      Inferring Relative Fitness from Single-Cell Phylogenies in Chromosomally Unstable Tumors
      TeX
      •
      Other
      •0•1•0•0•Updated Jul 15, 2026Jul 15, 2026

    • sunpathlab.github.io

      Public
      A content-first, sliding sidebar theme for Jekyll.
      CSS
      •
      Other
      •2.9k•0•0•0•Updated Jul 10, 2026Jul 10, 2026

    • Comet

      Public
      Computational modeling of evolving tumors
      Jupyter Notebook
      •
      MIT License
      •1•3•0•0•Updated Sep 18, 2025Sep 18, 2025

    • Butte

      Public
      BoUnds of Time Till Expansion, a computational framework to investigate the SCNA arrival time in the somatic evolution toward the most recent common ancestor of…
      R
      •
      MIT License
      •1•9•2•0•Updated Jan 23, 2024Jan 23, 2024

    • ith.Variant

      Public
      pipeline for calling somatic variants from multi-sampled genomic sequencing data
      Perl
      •
      Apache License 2.0
      •3•5•3•0•Updated Sep 24, 2022Sep 24, 2022
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