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@VicidominiLab Vicidomini Lab

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    Repositories list

    32 repositories

    • BrightEyes-MCS

      Public
      BrightEyes Microscope Control Suite
      Python
      •
      GNU General Public License v3.0
      •3•8•5•0•Updated Sep 14, 2026Sep 14, 2026

    • BrightEyes-FFS-GUI

      Public
      Graphical user interface for the BrightEyes-FFS package
      Python
      •0•0•0•0•Updated Sep 11, 2026Sep 11, 2026

    • conda-forge-staged-recipes

      Public
      A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6.3k•0•0•0•Updated Sep 5, 2026Sep 5, 2026

    • BrightEyes-FFS

      Public
      Analyze fluorescence fluctuation spectroscopy data with array detectors
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Aug 27, 2026Aug 27, 2026

    • BrightEyes-MCSLL

      Public
      BrightEyes-MCS LowLevel Firmware
      Other
      •0•1•0•0•Updated Aug 14, 2026Aug 14, 2026

    • BrightEyes-ISM

      Public
      A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.
      Python
      •
      GNU General Public License v3.0
      •8•20•1•0•Updated Jul 23, 2026Jul 23, 2026

    • nifpga-fast-fifo-recv

      Public
      An unofficial Python module for fast reading of data from NI FPGA FIFOs with a separate thread.
      Rust
      •
      MIT License
      •0•0•0•0•Updated Jul 21, 2026Jul 21, 2026

    • s2ISM

      Public
      Python
      •
      GNU General Public License v3.0
      •2•8•0•0•Updated Jul 10, 2026Jul 10, 2026

    • BrightEyes-FLISM

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 9, 2026Jul 9, 2026

    • BrightEyes-MCS-DataPrep

      Public
      Tools and libraries for BrightEyes-MCS HDF5 files.
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 9, 2026Jul 9, 2026

    • BrightEyes-MCS-Reader

      Public
      Reader-only utilities for BrightEyes MCS HDF5 files.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Jul 9, 2026Jul 9, 2026

    • BrightEyes-MCS-cylibs

      Public
      The cython libraries used by BrightEyes-MCS
      Cython
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 22, 2026Jun 22, 2026

    • nifpga-dll-rs

      Public
      Unofficial binding for NiFpga.dll
      Rust
      •
      Other
      •1•0•0•0•Updated Jun 5, 2026Jun 5, 2026

    • BrightEyes-Scope

      Public
      This repository accompanies the publication of BrightEyes-Scope, an open-source microscope architecture providing guidelines for building a laser-scanning micro…
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated May 28, 2026May 28, 2026

    • VicidominiLab.github.io

      Public
      Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
      JavaScript
      •
      MIT License
      •12•0•0•0•Updated Oct 4, 2025Oct 4, 2025

    • birfi

      Public
      Blind instrument response function identification from fluorescence decays
      pythonfluorescencelifetime
      pythonfluorescencelifetimedeconvolutionfluorescence-microscopy-imagingtcspcfluorescence-decays-analysislifetime-analysisfluorescence-lifetime-spectroscopytime-tagging
      Python
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Sep 18, 2025Sep 18, 2025

    • libttp

      Public
      Libraries for reading the data from time-tagging module (BrightEyes-TTM, https://github.com/VicidominiLab/BrightEyes-TTM)
      Python
      •
      Other
      •0•0•0•0•Updated Jul 25, 2025Jul 25, 2025

    • Active_stabilization

      Public
      Hardware and Software for active sample stabilization - Vicidomini Lab
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Dec 11, 2024Dec 11, 2024

    • SYLAP

      Public
      Pulse generator with 39 ps of resolution written in Verilog
      TeX
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

    • ISMAO

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 19, 2024Sep 19, 2024

    • ImSwitch

      Public
      ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modal…
      Python
      •
      GNU General Public License v3.0
      •23•0•0•0•Updated Jun 21, 2024Jun 21, 2024

    • smISM

      Public
      Code for simulating single molecule localization with array detectors
      Jupyter Notebook
      •0•0•0•0•Updated Dec 5, 2023Dec 5, 2023

    • nifpga-fifo-to-zmq

      Public
      An unofficial program to read data from an NI FPGA FIFO send them to ZMQ PULL as fast as possible
      Rust
      •
      MIT License
      •0•2•0•0•Updated Nov 17, 2023Nov 17, 2023

    • BrightEyes-TTM-WinDataReceiver

      Public
      The BrightEyes-TTM data receiver GUI for Windows
      0•0•0•0•Updated Nov 6, 2023Nov 6, 2023

    • BrightEyes-TTM

      Public
      BrightEyes Time-tagging module: open-source hardware, a time to digital converter, multi channels, with a resolution of 30 ps designed for fluorescence scanning…
      microscopyspectroscopytcspc
      microscopyspectroscopytcspcfluorescence-microscopytime-to-digital-converter
      VHDL
      •
      Other
      •5•20•1•0•Updated Oct 30, 2023Oct 30, 2023

    • napari-ISM

      Public
      A Napari Plugin for Analysing and Simulating Image Scanning Microscopy Datasets
      Python
      •
      GNU General Public License v3.0
      •3•6•1•0•Updated Sep 28, 2023Sep 28, 2023

    • BrightEyes

      Public
      0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

    • libspadffs

      Public
      libspadffs
      Python
      •
      Other
      •0•0•0•0•Updated Jun 29, 2022Jun 29, 2022

    • miplib

      Public
      A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
      Jupyter Notebook
      •
      Other
      •26•3•0•0•Updated Oct 6, 2021Oct 6, 2021

    • spad-ffs

      Public
      Python code to load and analyze confocal based FCS data measured with a SPAD array detector
      Python
      •
      Other
      •0•2•0•0•Updated Jun 10, 2021Jun 10, 2021
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