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    6 repositories

    • Evo_or_Thermo

      Public
      Code for analyzing thermodynamic and evolutionary signals in RNA genomic language models.
      Jupyter Notebook
      •0•0•0•0•Updated May 28, 2026May 28, 2026

    • Dyna-1

      Public
      Model for predicting micro-millisecond motions from protein sequence and/or structure
      nmrprotein-designprotein-dynamics
      nmrprotein-designprotein-dynamicsnmr-dataprotein-deep-learning-algorithm
      Jupyter Notebook
      •
      Other
      •11•78•0•0•Updated May 15, 2026May 15, 2026

    • apptainers

      Public
      Some publicly-available apptainers
      Shell
      •0•0•0•0•Updated May 15, 2026May 15, 2026

    • AFCluster-2

      Public
      AFCluster-2
      Python
      •0•1•0•0•Updated Feb 27, 2026Feb 27, 2026

    • arnie

      Public
      Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.
      Python
      •
      MIT License
      •32•107•14•0•Updated Nov 20, 2025Nov 20, 2025

    • EternaFold

      Public
      Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
      C++
      •
      Other
      •14•67•4•4•Updated Jul 17, 2024Jul 17, 2024
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