Skip to content

paulagrcg/phenodistance

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

86 Commits
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Phenotypic cliffs on RNA GP map

functions folder

  • basefunctions.py: all the basic functions to work with the GP map.
  • structurefunctions.py: functions to calculate structural quantities (robustness, evolvability) in phenotypic distance framework.

plots and main

code for plots and phenotypic distance quantities on the RNA12 GP map

RNA20

sampled_sequences are the filtered and sampled fRNA sequneces that we use for site-scanning

The data plotted in Fig 4 correlations is in RNA20_structures_h_vs_rho_significant.csv

About

No description, website, or topics provided.

Resources

Stars

Watchers

Forks

Packages

 
 
 

Contributors