Skip to content
View pmandros's full-sized avatar
:octocat:
:octocat:

Block or report pmandros

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
pmandros/README.md

Hey there, I'm Panos (short for Παναγιώτης)

        


About Me

I’m a Machine Learning and AI researcher with a focus on scientific discovery—developing theory and algorithms to uncover novel and causal mechanisms behind complex phenomena in the life sciences. I earned my PhD at the Max Planck Institute for Informatics and Saarland University, where I worked on information retrieval, statistical learning theory, and the exact discovery of robust multivariate, non-linear interactions. Afterward, I joined Harvard University to study the molecular mechanisms of cancer by inferring and analyzing gene regulatory networks from data.

My work spans traditional statistics (e.g. hypothesis testing, decision trees) through to modern approaches like deep neural networks, LLMs, computer vision, graph methods, and interpretable AI. I’ve also had the privilege of mentoring students throughout their academic journeys, which has been one of the most rewarding aspects of my career.

Pinned Loading

  1. node2vec2rank node2vec2rank Public

    Node2vec2rank is an algorithm that can compare graphs to find their differences, e.g., in a case-control study that utilises gene regulatory networks.

    Jupyter Notebook 7

  2. fodiscovery fodiscovery Public

    Discovering reliable (approximate) functional dependencies in mixed-type tabular data

    Java 6 3

  3. TransformerNumberSorter TransformerNumberSorter Public

    A Transformer neural network that sorts numbers

    Jupyter Notebook

  4. HistopathologyClassificationGeneralization HistopathologyClassificationGeneralization Public

    Investigating the generalization in classifying histopathology images by introducing slide stain augmentetations

    Jupyter Notebook

  5. QuackenbushLab/tcga-data-nf QuackenbushLab/tcga-data-nf Public

    Workflow to download and prepare TCGA data

    HTML 3 4

  6. netZoo/netbooks netZoo/netbooks Public

    Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..

    Jupyter Notebook 45 27