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6 changes: 6 additions & 0 deletions AGENTS.md
Original file line number Diff line number Diff line change
Expand Up @@ -36,6 +36,12 @@ table below — everything else is delegated.
| Optional-dependency gating | `src/cellmapper/check.py` |
| Method-level behavior (parameters, return shapes) | docstrings in `src/cellmapper/model/` |

## Review Guidelines

For GitHub PR reviews, use `REVIEW_GUIDE.md` as the canonical review workflow and
source of review-specific risk areas, testing checks, and documentation-impact checks.
This file only owns the project invariants and source-of-truth map below.

## Critical Invariants

- **Self-mapping mode** activates when `reference is None` **or** `reference is query` (object identity). See `CellMapper.__init__` in `src/cellmapper/model/cellmapper.py`.
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