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1. scTenifoldpy scTenifoldpy Public

   A python package implements scTenifoldnet and scTenifoldknk

   Python 58 8

2. biodbs biodbs Public

   Unified Python interface for biological databases

   Python 1 1

3. pipeGEM pipeGEM Public

   This is a package for visualizing and analyzing multiple metabolic models. It also allow users to integrate omic data, metabolic tasks, and medium data with genome-scale metabolic models (GEMs).

   Python 2

4. submission-nav submission-nav Public

   A practical AI skill for academic submission workflows—turn manuscripts into structured journal shortlists, compare author guidelines, and plan revisions with strategy-aware recommendations.

   Python

5. ppi_net_builder ppi_net_builder Public

   Protein-Protein Interaction (PPI) network construction and analysis in Python

   Python 1

6. dox-ac16-omics-analysis dox-ac16-omics-analysis Public

   Python